Gene Ccel_0819 details

Gene Information

• Locus tag: Ccel_0819
• Symbol: smpB
• ID: 7309666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 939487
• End bp: 939951
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643607761
• Product: SsrA-binding protein
• Protein accession: YP_002505177
• Protein GI: 220928268
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.796399
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAGG AAGCAGTTAA GATTGTTGCT CAAAATAAAA AAGCTCGACA TGATTATTTT 
ATCGAAGAAA CCATAGAAGC AGGCATTGTG CTTTCAGGTA CAGAGGTAAA GTCTGTCCGA 
CAGGGCAAGC TCAATTTAAA GGAAAGCTAT GCTTCTATTG TTGAGGGGGA AGTTATTGTA 
AGCGGAATGC ATATAAGCCC TTACGAACAA GGTAATATTT TTAACAAGGA CCCCTTGCGT 
GACAGAAAGC TGCTTTTGCA CAAGTCTGAA ATAAACAGGC TTATAGGGTT GACCCAACAA 
AAGGGTTACA CGCTAGTTCC CGTTCAGGCA TACTTAAAAC GTGGTATGGT TAAAATAGAA 
CTAGGCGTTG CACGCGGTAA AAAACTGTAT GACAAAAGAG ACGATATTGC AGCCCGTGAT 
GCTAAGAGAG AAATTGACAG AAAGATGAAA GAGCAGCTCA GGTAA 

 

Protein sequence

MVKEAVKIVA QNKKARHDYF IEETIEAGIV LSGTEVKSVR QGKLNLKESY ASIVEGEVIV 
SGMHISPYEQ GNIFNKDPLR DRKLLLHKSE INRLIGLTQQ KGYTLVPVQA YLKRGMVKIE 
LGVARGKKLY DKRDDIAARD AKREIDRKMK EQLR