| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0793 |
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| Symbol | truA |
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| ID | 7309646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 914279 |
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| End bp | 915016 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643607735 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002505151 |
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| Protein GI | 220928242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000229391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA TTAGGCTTAC TATTGAATAT GACGGTACAA ATTATCATGG TTGGCAGATT
CAGAAAAATG CTAAAACAGT ACAGGAAGTA ATTCAAAAAG CACTCTCTAA GCTTTTGGGA
GAAGACGTGG GGGTTACCGG ATGCAGTCGA ACTGATGTAG GAGTGCATGC ATACGGACAG
GTTGCACATT TTCTGACGGA TTCCAAAATA CCCGGAGACA AATTTTCTTA TGCAATAAAT
AATTTGCTGC CCGATGATAT AGTTATTAAG AATTCAGAAG AGGTTCCAGA AGAATTTCAT
GCCAGATACT CTGCAAAAGG TAAAAAGTAC AGATATTTGA TATACAATTC ACCACACGCT
TCAGCTATTA TGAGGAACAG GTCGTGCCAC GTCAGACCTG AACTTAATGT TGCTGAAATG
CAAAAAGCGG CAGGATATTT TAAAGGTGAA CATGATTTTT TAGCATTTCA GGCTACTGGA
GGACAGGTTA GAAGTACTGT AAGAGAGATT TATGGTATGG AAGTTTATGT AAAAGAAGAT
AATATGATTT CTATAGAAGT TTCAGGAAAC GGATTTTTGT ATAATATGGT AAGGATAATA
GCAGGAACTC TTATATATGT TGGAATGGGA AAGCTGCATG AGTCCGAAAT TCCCGGAATT
ATAGCAGGAC TTGACAGAAC AAAGGCAGGG AAGACTGCTC CTGCACAAGG GTTGTATTTA
GTGCAGATTT ACTATTAG
|
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| Protein sequence | MRKIRLTIEY DGTNYHGWQI QKNAKTVQEV IQKALSKLLG EDVGVTGCSR TDVGVHAYGQ
VAHFLTDSKI PGDKFSYAIN NLLPDDIVIK NSEEVPEEFH ARYSAKGKKY RYLIYNSPHA
SAIMRNRSCH VRPELNVAEM QKAAGYFKGE HDFLAFQATG GQVRSTVREI YGMEVYVKED
NMISIEVSGN GFLYNMVRII AGTLIYVGMG KLHESEIPGI IAGLDRTKAG KTAPAQGLYL
VQIYY
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