Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0787 |
Symbol | |
ID | 7309640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 909298 |
End bp | 910245 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643607729 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_002505145 |
Protein GI | 220928236 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0028961 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGAAA TAGAAAAGCC TAGAATTGAA TGTGTATCAA ATAGCGATGA TAACACTTAT GGCAAGTTTA TAGTTGAGCC TTTAGAAAGA GGCTATGGTA TTACACTTGG TAATTCTTTA AGAAGAATAT TGCTTTCTTC TTTACCCGGT TCTGCTGTCA ATTCAATAAA GATTGATGGA GTACTGCATG AATTCTCTAC AGTTCCAGGT GTAGTAGAAG ACGTTACTGA GATAATACTT AATATCAAAT CTCTTTCATT ATTAGTTCAT GGCGAAGGAT CAAAAGTTAT TTATATCGAT GCAAATGGAG AAGGGCCAAT AACAGCTGGT GATATTATCA CTGACCAAGA TGTAGAAATA TTAAATCCTG ACCTTCATAT TGCAACATTG AATGGCGATC ATAGATTCTA CATGGAGATG GTAATTAGTA AAGGACGAGG ATATGTTTCT GCTGATAAGA ATAAACAGGC TGGTCAACCA ATAGGTGTGA TTCCTGTTGA TTCAATATAT ACTCCCGTCA AAAAAGTAAA TTACACTGTT GAAAATACAC GTGTTGGTCA GATTACTGAT TATGATAAGC TGACACTTGA AGTTTGGACT GACGGAAGTA TTAATCCTGA CGAAGCTATA AGTCTTGGAG CTAAAATACT TAGCGAGCAT TTAAATCTGT TTGTAGATTT GTCTGATCAG GCTAAGCATA CTGAGATTAT GGTTGAAAAG GAAGAAACCA AAAAAGAGAA AGTTCTTGAA ATGACTATTG AGGAGCTTGA TTTGTCAGTT AGATCATATA ACTGCTTAAA GAGAGCAGGA ATCAATACCG TAGAGGACCT TACCAACAGA ACCGAAGAGG ATATGATGAA GGTAAGAAAT CTTGGAAGAA AGTCTCTTGA AGAGGTTCTT CAAAAACTTC AGGCACTTGG GTTGTTCTTG GCACCAAGTG AAGAATAA
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Protein sequence | MIEIEKPRIE CVSNSDDNTY GKFIVEPLER GYGITLGNSL RRILLSSLPG SAVNSIKIDG VLHEFSTVPG VVEDVTEIIL NIKSLSLLVH GEGSKVIYID ANGEGPITAG DIITDQDVEI LNPDLHIATL NGDHRFYMEM VISKGRGYVS ADKNKQAGQP IGVIPVDSIY TPVKKVNYTV ENTRVGQITD YDKLTLEVWT DGSINPDEAI SLGAKILSEH LNLFVDLSDQ AKHTEIMVEK EETKKEKVLE MTIEELDLSV RSYNCLKRAG INTVEDLTNR TEEDMMKVRN LGRKSLEEVL QKLQALGLFL APSEE
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