Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0743 |
Symbol | |
ID | 7309596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 866523 |
End bp | 867272 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643607681 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_002505101 |
Protein GI | 220928192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.508174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGT TAAGAATTAT TTTTTTAAAT CGAAGAATTT TACTTATTGC AGCAGTTTTA ATAATTGCTA TATTAGCTCT ACCAGTTATT TTGTTCATCG AAATATCTAC CTCAGATACA TTTACAGATC CCAAAAGCGG TGTAATAGTT ATTGATCCGG GGCATGGAGG AATCGACGGG GGAACAAGCA GGGACGGAGT ATTGGAAAAA GAAATAAATC TTGATATAGC TAAAAAGCTA AAATCCATTC TTATGGAACG GGGATATAAA ATAATAATGA CAAGGGAAGA AGATGTTTCC CTTGAAAGTC TTGATAATAG CCGAAAATCT AGGCACTTAA GGGATTTGAC AGCTAGGGCC AATATTATTA ATAATAGCAA TGCACAACTG TTTCTAAGCA TACATGTTAA CTGCAATATA AAAAAGCCTG CGACTGATGG TGCAATAGTC TTTTTCTGCA AAAAGTATGA GCAGAATAGA ACGTTGGCCT TATGTATTCA GCGAGTATTA AACAACATGG TTGTAGACGG GAAAAAACGA AACGTTCATG ACCCGGTACA GGCAAAATAT TATGTTCTTA ACTATACTAA TATACCCGGA GTTATAGTTG AAACGGGTTT TATTTCAAAC GAGGAAGAAA GGCAGAAATT AGCAAAGGGC ACCTTTCGAC AGGAGCTCGC AAAATCAATA GCAAAGGGAA TAGAACAATA TTTAGATGAA TCAAGTAAGG TATCGACTCC TGCATCATAA
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Protein sequence | MRKLRIIFLN RRILLIAAVL IIAILALPVI LFIEISTSDT FTDPKSGVIV IDPGHGGIDG GTSRDGVLEK EINLDIAKKL KSILMERGYK IIMTREEDVS LESLDNSRKS RHLRDLTARA NIINNSNAQL FLSIHVNCNI KKPATDGAIV FFCKKYEQNR TLALCIQRVL NNMVVDGKKR NVHDPVQAKY YVLNYTNIPG VIVETGFISN EEERQKLAKG TFRQELAKSI AKGIEQYLDE SSKVSTPAS
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