Gene Ccel_0712 details

Gene Information

• Locus tag: Ccel_0712
• Symbol: rimM
• ID: 7309569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 822722
• End bp: 823231
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643607651
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002505071
• Protein GI: 220928162
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000237491
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGAAT ATTTGATTGT TGGACAATTG ATAAATACCC ATGGCGTAAA GGGCGAACTA 
AAAGCAACTT CCCAAACGGA TGATCCTCAG AGATTTAAAA AGCTCAAATG GGTTTATATA 
GATAAAAATG GAAGCTTGGA AAAATACGAC ATAAATGGTG TGAAATTCTT TAAGCAGTTT 
ATCATTATAA AGTTTCAGGG TGTTGACAGC ATAGAAGAGG CTGAAAAGCT AAAGGGCTTT 
TACATTAAGG TTGATAGGGC AAATGCTGTG AAGCTGCCTG AGAACTCCTT CTTTATTTCC 
GATATTATCG GACTGAAGGT CTATGATGAA AATAATCAAC TCCTTGGGGA ATTAAAGGAT 
GTAATACAGA CGGGCAGTAA TGATGTATAT GTTGTAAGGG ATTCAGACTC AAAGGAGATT 
CTCATTCCTG CACTAAAGAG TGTTGTGAAG GAAGTTTCCA TCGAAGAAGG AAAAATTTCA 
GTTATATTAC CGAAAGGACT GCTTGATTAA 

 

Protein sequence

MLEYLIVGQL INTHGVKGEL KATSQTDDPQ RFKKLKWVYI DKNGSLEKYD INGVKFFKQF 
IIIKFQGVDS IEEAEKLKGF YIKVDRANAV KLPENSFFIS DIIGLKVYDE NNQLLGELKD 
VIQTGSNDVY VVRDSDSKEI LIPALKSVVK EVSIEEGKIS VILPKGLLD