Gene Ccel_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0700 
Symbol 
ID7309558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp809744 
End bp810721 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content37% 
IMG OID643607639 
ProductROK family protein 
Protein accessionYP_002505059 
Protein GI220928150 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00119336 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA GTATTGGTGT TGAATTGGGA GTTAAAAATA TCGTTGCAGG TATACTTGAT 
AAAAATGGGA AATTAATTCG CCGAGATGCT GTACCAACGA ATAAGAACAA GGATTTTAAA
GAAATAATAA AGGATCTTTG TTCCTTAATA AAAAAAATAA CTGCAGACGA AGATATTGAA
CTAAGGAGTG TTAAGTATAT AGGAGTAGGG TGCCCAGGAG TAACTGATAA TAAGCATGGT
GTTATTTTAA AAAACTACTC CCTAAATTTC ACCAACGCAA ATGTGAGGGA TGAAATTCAA
AAGTATTTAA AAATTCCTGT TTTTATAGAA AACGATGCAA ACTGCGTAGC AATAGCTGAA
TACCTGCTTG GTGCCGCATA TGGTACTGAA AGCTCACTTA TTATTAAGGT AGGTGTAGGT
ATCGGCGGGG GAATTATTAT CGATGGTAGT ATATATAACG GATTTAACTT CGGCGGAACA
GAATTCGGTC ATATGGTTAT AGATTATAAA GGAAGATCTT GCAGCTGTGG CAGAAAGGGT
TGCTGGGAGC AGTACGTATC CGGTTCTGCA CTTATTGATC AAACCAGACA GCTGGCATCA
GAGAACCCGG ATTCCATTCT GGGCAATATG GTTAAAAACA ATGTTGCACA GATAACTGAA
TTGACGATAT TTGAAGCTGC CAAGGCCGGT GATGAAAAAG CAAAAAAATA TTGTTCCGAA
TTCATAGACT ATTTTGCTGA GGGATTAACA AACATTGTAA ATATATTAAT GCCGGAAGTT
GTAATTATTG CAGGACCTAT AAGTAAGCTG GGAAATACAA TTGTAAAGCC GCTGGTTGAG
CTTTTGAAAG AAAGAATATA TTCAAAGGAG CTTAATCTTC CTGAGTTTAA AATGGCGGAA
ATGGGCAACG CAGGGATTAT AGTCGGTGCT GCAATGTTGG GAGCTTTCAA GGATGAAAGA
CTGGACGATT TAGTTTAG
 
Protein sequence
MKYSIGVELG VKNIVAGILD KNGKLIRRDA VPTNKNKDFK EIIKDLCSLI KKITADEDIE 
LRSVKYIGVG CPGVTDNKHG VILKNYSLNF TNANVRDEIQ KYLKIPVFIE NDANCVAIAE
YLLGAAYGTE SSLIIKVGVG IGGGIIIDGS IYNGFNFGGT EFGHMVIDYK GRSCSCGRKG
CWEQYVSGSA LIDQTRQLAS ENPDSILGNM VKNNVAQITE LTIFEAAKAG DEKAKKYCSE
FIDYFAEGLT NIVNILMPEV VIIAGPISKL GNTIVKPLVE LLKERIYSKE LNLPEFKMAE
MGNAGIIVGA AMLGAFKDER LDDLV