Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0700 |
Symbol | |
ID | 7309558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 809744 |
End bp | 810721 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643607639 |
Product | ROK family protein |
Protein accession | YP_002505059 |
Protein GI | 220928150 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00119336 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA GTATTGGTGT TGAATTGGGA GTTAAAAATA TCGTTGCAGG TATACTTGAT AAAAATGGGA AATTAATTCG CCGAGATGCT GTACCAACGA ATAAGAACAA GGATTTTAAA GAAATAATAA AGGATCTTTG TTCCTTAATA AAAAAAATAA CTGCAGACGA AGATATTGAA CTAAGGAGTG TTAAGTATAT AGGAGTAGGG TGCCCAGGAG TAACTGATAA TAAGCATGGT GTTATTTTAA AAAACTACTC CCTAAATTTC ACCAACGCAA ATGTGAGGGA TGAAATTCAA AAGTATTTAA AAATTCCTGT TTTTATAGAA AACGATGCAA ACTGCGTAGC AATAGCTGAA TACCTGCTTG GTGCCGCATA TGGTACTGAA AGCTCACTTA TTATTAAGGT AGGTGTAGGT ATCGGCGGGG GAATTATTAT CGATGGTAGT ATATATAACG GATTTAACTT CGGCGGAACA GAATTCGGTC ATATGGTTAT AGATTATAAA GGAAGATCTT GCAGCTGTGG CAGAAAGGGT TGCTGGGAGC AGTACGTATC CGGTTCTGCA CTTATTGATC AAACCAGACA GCTGGCATCA GAGAACCCGG ATTCCATTCT GGGCAATATG GTTAAAAACA ATGTTGCACA GATAACTGAA TTGACGATAT TTGAAGCTGC CAAGGCCGGT GATGAAAAAG CAAAAAAATA TTGTTCCGAA TTCATAGACT ATTTTGCTGA GGGATTAACA AACATTGTAA ATATATTAAT GCCGGAAGTT GTAATTATTG CAGGACCTAT AAGTAAGCTG GGAAATACAA TTGTAAAGCC GCTGGTTGAG CTTTTGAAAG AAAGAATATA TTCAAAGGAG CTTAATCTTC CTGAGTTTAA AATGGCGGAA ATGGGCAACG CAGGGATTAT AGTCGGTGCT GCAATGTTGG GAGCTTTCAA GGATGAAAGA CTGGACGATT TAGTTTAG
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Protein sequence | MKYSIGVELG VKNIVAGILD KNGKLIRRDA VPTNKNKDFK EIIKDLCSLI KKITADEDIE LRSVKYIGVG CPGVTDNKHG VILKNYSLNF TNANVRDEIQ KYLKIPVFIE NDANCVAIAE YLLGAAYGTE SSLIIKVGVG IGGGIIIDGS IYNGFNFGGT EFGHMVIDYK GRSCSCGRKG CWEQYVSGSA LIDQTRQLAS ENPDSILGNM VKNNVAQITE LTIFEAAKAG DEKAKKYCSE FIDYFAEGLT NIVNILMPEV VIIAGPISKL GNTIVKPLVE LLKERIYSKE LNLPEFKMAE MGNAGIIVGA AMLGAFKDER LDDLV
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