| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0678 |
|---|
| Symbol | |
|---|
| ID | 7312133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 783365 |
|---|
| End bp | 784705 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607618 |
|---|
| Product | MiaB-like tRNA modifying enzyme YliG |
|---|
| Protein accession | YP_002505038 |
|---|
| Protein GI | 220928129 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000258003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA AGATAGGCAT CGTCTCATTG GGATGCCCCA AGAATTTAGT AGACAGCGAG
ATAATGCTGG GTATGCTGTC ACATTCAGAT TATGAAATTG TAAACAGCAA GGAAGATGCG
GATGTACTTA TAGTAAATAC ATGCGGATTT ATTGAATCCG CTCAGCAGGA ATCTATAAAT
ACAATTTTAG AAATGGCAGA GGAAAAGGGA CGTAATTGCG AGGTACTTAT AGTTACAGGA
TGTATGGCAG AAAGATATAA AGAAAAAATA CTTGAACAAA TACCGGAAGT GGATGCTGTT
CTGGGTACAG GGAATTATAA AGAAATAGCG GAAGTAATAA ATCTTGCGTA TATGGGTGAA
AAAACAGTAG CTTATGGAAA GTTGGATGAA ACGGATTATC TTGATGAAGA GAGAGTACTA
TCATCCAGCA AACATTCTGT CTACTTAAAG ATATCAGAAG GATGTGACAA CCGCTGCACA
TACTGTATAA TACCATTTTT GAGAGGTAAA TACAGGAGCC GTAAAATGGA GTCTTTGGTC
AGAGAAGCTG AGCTTTTGGC TGGAAAAGGT ACAAAGGAAA TCGTTATCGT TGCACAGGAC
AGTACTCGCT ACGGTATTGA CTTATATGGC AAAAAGATGC TTCCTGAATT AATCAGAAAG
ATATCGGATA TTAGTGGAAT AGAATGGGTA AGGCTTTTGT ATTGCTACCC TGAGGAAATA
GATGATGAGC TGATTAACGA AATAGCTATA AATCCAAAGG TGTGCAAATA CCTTGACATA
CCTATTCAGC ATGCATCCGA TAGAGTACTA AAGCAAATGG GAAGAAGAGG AACTATTTCT
GAGATTAAGC AGGTACTAAA CAAATTAAGA GAGAAAGTCA GCGGCATTAC TATCAGAACA
TCACTGATTG TAGGCTTTCC AGGTGAGACA GAGGAAGATT TTGAAGAATT GATGGCCTTT
GTAAAAGAAT TCAGATTGGA TAGAGTGGGT GTATTCACAT ATTCAAAAGA AGAGGGTACA
GCGGCTGCAA AGATGAAAAA CCAGATACCA AAGCACATTA AAATAAAAAG GCAAAAAAAG
ATTCTTGAGC TTCAAAATGT AATTAGCAGG GAAATAAATC AAAGTAGGAA TGGAAAAGTC
TACAAAACTA TAGTTGACGG TATTGCTGAT GATGGTATAT TCTATTATGG ACGTACTTAT
GCAGAAGCTC CTGAAATTGA TGGGATTATT TATTTTACAA GTCCCGAGGA GCTTTCAATA
GGTAGTTTTA TAAATGTAAG GATTCTCAAT ACCGAAGATT ATGATTTGAT AGGAGAGGTC
ATAAATGAAT TTACCGAATA A
|
|---|
| Protein sequence | MKKKIGIVSL GCPKNLVDSE IMLGMLSHSD YEIVNSKEDA DVLIVNTCGF IESAQQESIN
TILEMAEEKG RNCEVLIVTG CMAERYKEKI LEQIPEVDAV LGTGNYKEIA EVINLAYMGE
KTVAYGKLDE TDYLDEERVL SSSKHSVYLK ISEGCDNRCT YCIIPFLRGK YRSRKMESLV
REAELLAGKG TKEIVIVAQD STRYGIDLYG KKMLPELIRK ISDISGIEWV RLLYCYPEEI
DDELINEIAI NPKVCKYLDI PIQHASDRVL KQMGRRGTIS EIKQVLNKLR EKVSGITIRT
SLIVGFPGET EEDFEELMAF VKEFRLDRVG VFTYSKEEGT AAAKMKNQIP KHIKIKRQKK
ILELQNVISR EINQSRNGKV YKTIVDGIAD DGIFYYGRTY AEAPEIDGII YFTSPEELSI
GSFINVRILN TEDYDLIGEV INEFTE
|
|---|
| |