Gene Ccel_0646 details

Gene Information

• Locus tag: Ccel_0646
• Symbol: cobT
• ID: 7309511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 743113
• End bp: 744171
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643607587
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_002505007
• Protein GI: 220928098
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0289601
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTTG AAGAAGCGAT AAATTCCATT AAAGAACTGA ATATAGAAAC GATGCAGAAG 
GCACAGAAAA GGTTGGACAA CTTAACAAAG CCTCTGGGAA GCCTGGGTCG TTTGGAGGAA 
ATCGTAAAAC AGCTTGCCGG AATTACAGGA GAGTTGTTTC CTTGTGTAAA AAATAAAAAA 
ATCGTAATAA TGTGTGCAGA TAACGGAGTT GTTGAGGAAG GAGTCAGTTC GTGCCCTAAA 
AGCGTTACTT CTTCCGTTAC ACAAAATTTT CTGAAAGGTT TTACGGGAGT GAATGTTCTT 
TCAAGACATT CGAGGGCAGA TATAGTTGTT GTGGATGTTG GTGTTGATGA TGATATTGAC 
TGTCCCGGCG TTATAAACAG AAAAATAAGA AAAGGTACAT GGAATATTAT GAAAGGCCCT 
GCAATGACCA GAAACGAAGC TATAAAAGCT ATTGAAACGG GAATTGAGAT TGTTGGAAAG 
TTAAAGGAAA AAGGAGTAAA TCTGCTTGGT ACAGGTGAGA TGGGGGTAGG AAACACAACT 
ACAAGCAGTG CAGTAGCATC TGTACTTATC GGTAACGATA TAGGTGAAAT GGTAGGCAAG 
GGGGCGGGAC TGACCCAGAA AGGTCTTATT AATAAGATTG AGATTATTAA AAACGCAATA 
GATATCAATA AACCGAATCC GTCCGACCCT ATAGATGTAC TGGCAAAGGT CGGCGGTTTT 
GACATTGCAG CACTTACCGG GTGTTTTCTT GGAGCAGCAG CCTACAGGCT TCCTGTCATG 
ATTGACGGAT TTATCTCGGC TACCGCTGCA TTGGCGGCAA TAAAAATAAA GCCCGAGTGC 
AGAAATTATA TTCTTCCTTC ACATGGTTCT GCTGAACCCG GAAACAAGAA AATAATGGAA 
GCACTTGACA TGAGCCCCAT GCTCTTATTG GAAATGCGTT TAGGTGAGGG TTCAGGAGCT 
GCACTTGCAT TTCATATTAT AGACGCTGCT GTTGCAGCCT ATAATGAGAT GGGAACATTC 
GGGGATGCAA AAATTGAACA ATACAAACCA TTAGAATAG 

 

Protein sequence

MTFEEAINSI KELNIETMQK AQKRLDNLTK PLGSLGRLEE IVKQLAGITG ELFPCVKNKK 
IVIMCADNGV VEEGVSSCPK SVTSSVTQNF LKGFTGVNVL SRHSRADIVV VDVGVDDDID 
CPGVINRKIR KGTWNIMKGP AMTRNEAIKA IETGIEIVGK LKEKGVNLLG TGEMGVGNTT 
TSSAVASVLI GNDIGEMVGK GAGLTQKGLI NKIEIIKNAI DINKPNPSDP IDVLAKVGGF 
DIAALTGCFL GAAAYRLPVM IDGFISATAA LAAIKIKPEC RNYILPSHGS AEPGNKKIME 
ALDMSPMLLL EMRLGEGSGA ALAFHIIDAA VAAYNEMGTF GDAKIEQYKP LE