| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0605 |
|---|
| Symbol | |
|---|
| ID | 7309474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 699556 |
|---|
| End bp | 701124 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643607545 |
|---|
| Product | RNA binding metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002504966 |
|---|
| Protein GI | 220928057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGTAAAA TAATAGTTAA TATTTTAATT GGATTGGCCT GCGGATTAAT TATTGCAGTA
ATTGCTTCTA AAATATTTTA TGATAGAGGT TTTGAGGCCA GAAAAAAGCA GGCAGAAGCC
CAGATAGGCA GTGCCGAGCA GGAGGCCCAA AGAATTGTTG GAGAGGCTTT GAAACAAGGT
GAGAATAAGA AGAGGGAAGC ACTTCTTGAG GCTAAAGAAG AAATTCATAA AAGCAGAGTA
GAGCTTGACA GGGATATAAA GGACAGACGA AATGAGTTTA TGAGGCAGGA AAGAAGGCTT
GTTCAGAAGG AAGAAACACT CGACAAGAAA GTAGAAGCAC TCGAACAGAA AGATGAAGCT
TTAAATAAAA AGCTAAAGGA TATTGAAGTT TTACAGGAGC AGTCTGGAGA GCTTGTTAAA
AAGCAAACCG AAGAGCTTGA AAGAATTGCT GGATTATCTG TAGAAGATGC TAAAGAATAC
TTGCTTCGTA ACATTGAAAA CGAAGTAAAA CATGATGCTG CGGCACTTAT TAAGGAAATT
GAGGCTAACG CCAAGCAGGA AGCTGACCGC AAGGCAAAGG ATATATTGGC AACTGCGATT
CAAAAGTGTG CTGCCGACCA TGTATCTGAA GCTACTGTTT CCGTAGTACC TTTACCTAAT
GATGAGATGA AGGGAAGAAT TATCGGTCGT GAGGGTAGAA ACATAAGAAC TCTTGAGACA
TTGACAGGAA TTGACTTGAT TATTGATGAT ACACCTGAGG CCGTAATACT GTCTGGATTT
GATCCTATCC GAAGAGAGGT TGCCAGATTA ACTCTTGAGA AGCTTATTCT TGATGGAAGA
ATTCATCCGG CAAGAATTGA AGAAATGGTT GAAAAAGCTA AGAAAGAAGT TGACAATACC
ATTCGTCAGG AGGGTGACAA TGCAGCATTT GAAACAGGCG TACACGGCTT GCATCCGGAA
CTTGTAAGAC TATTGGGTAA ACTGAAGTTC AGAACTAGTT ACGGACAGAA TGTACTTAAC
CATTCCATAG AGGTATCTCA TCTGGCAGGT ATAATGGCTG CTGAACTTGG TGTTGATGTT
CTTCTGGCAA AAAGAGCTGG TTTGCTGCAT GACATCGGAA AGGCTATTGA CCATGAGGTT
GAGGGTTCCC ATGTTACTAT CGGTGCCGAT GTGGCTAAGA AGTACAAGGA AAGTACCGAT
GTGGTAAATG CCATTCTTTC TCATCACGGT GATGTTGAGG CAACAAATGT AGTTTCAGTA
CTTGTACAGG CTGCGGATTC TATTTCAGCA GCAAGACCAG GTGCGAGAAG GGAAACACTT
GAATCCTACA TCAAGCGTCT TGAGAAGCTC GAAGAGATTG CAAACTCCTT TGAGGGAGTT
GAAAAGTGTT TTGCAATTCA GGCAGGAAGA GAAATCAGAA TTATGGTTAA GCCTGATGTT
GTAAATGATA CAGATATAGT TCTGAAGGCA AGAGAAATAG TCAAGAAGAT AGAAGATGAG
CTTGAATATC CCGGACAGAT TAAAGTTACT CTGCTAAGGG AAACTAGAGC TATTGAATAT
GCAAAATAA
|
|---|
| Protein sequence | MCKIIVNILI GLACGLIIAV IASKIFYDRG FEARKKQAEA QIGSAEQEAQ RIVGEALKQG
ENKKREALLE AKEEIHKSRV ELDRDIKDRR NEFMRQERRL VQKEETLDKK VEALEQKDEA
LNKKLKDIEV LQEQSGELVK KQTEELERIA GLSVEDAKEY LLRNIENEVK HDAAALIKEI
EANAKQEADR KAKDILATAI QKCAADHVSE ATVSVVPLPN DEMKGRIIGR EGRNIRTLET
LTGIDLIIDD TPEAVILSGF DPIRREVARL TLEKLILDGR IHPARIEEMV EKAKKEVDNT
IRQEGDNAAF ETGVHGLHPE LVRLLGKLKF RTSYGQNVLN HSIEVSHLAG IMAAELGVDV
LLAKRAGLLH DIGKAIDHEV EGSHVTIGAD VAKKYKESTD VVNAILSHHG DVEATNVVSV
LVQAADSISA ARPGARRETL ESYIKRLEKL EEIANSFEGV EKCFAIQAGR EIRIMVKPDV
VNDTDIVLKA REIVKKIEDE LEYPGQIKVT LLRETRAIEY AK
|
|---|
| |