| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0578 |
|---|
| Symbol | |
|---|
| ID | 7309450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 670090 |
|---|
| End bp | 670479 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643607518 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_002504939 |
|---|
| Protein GI | 220928030 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA TAGAACTTGC ATCACGTGCA AGAAAGGCTA TGGATACAGC CTATGCCCCC
TATTCAAAGT TCAGGGTGGG GGCGGCACTG TTAACAGCTT CTGGCAGAGT ATACACGGGC
TGCAATATTG AAATAGCTTC GTTCGGTGCA ACAAATTGTG CGGAGAGAAC TGCAATTTTT
AAGGCTGTTT CCGAAGAGGG CAGGATAAAG ATTGATAAAA TTGCTATAGC CAGTGATGAC
GAGGATTACA TATATCCCTG TGGCATATGC AGACAGGTAA TGGCTGAATT TGCAGACGAT
GAAATGGAGC TCATATGTAC CAGAAAAAAT GGGGAATACA AAAAAATGAG GTTTGGAGAT
TTGCTTCCAA ATGCATTCCG AACTTTTTAA
|
|---|
| Protein sequence | MTEIELASRA RKAMDTAYAP YSKFRVGAAL LTASGRVYTG CNIEIASFGA TNCAERTAIF
KAVSEEGRIK IDKIAIASDD EDYIYPCGIC RQVMAEFADD EMELICTRKN GEYKKMRFGD
LLPNAFRTF
|
|---|
| |