| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0567 |
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| Symbol | |
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| ID | 7309435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 652866 |
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| End bp | 653642 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643607502 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002504928 |
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| Protein GI | 220928019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0123603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA GATTATTATG GGCAAAGGCA AAAAATATAC CTAAAAAAGT TATGATTATT
TTTTTACTGA TATCTGCACT ATTTGTTTCG ATAGGTTATA CAGCCAAATC GGCCGGAGTT
TTTAATCCTT CAAAGCATCT TCCTATTTAC AGCGTTGAAA CAGAACAAAA TGCTGTTTCA
ATTACCTTTG ATTGTGCATG GGGAGCAGAT GACATTCCTC AAATACTGGA CACCCTGAAA
AAAGATAGCA TTAAAGCAAC GTTTTTTATG GTTGGACAGT GGGCTGAAAA ATTCCCTGAT
GCAGTAAAGC TTATGGCCAA TGAAGGCCAC GACATTGCCA ATCACGGATA TTCGCATTTG
CGTATGAGTA CAATCAGCAA GGAGAAGTGT AAGAGTGAAA TCGAGATGTG CAACAAAAAG
CTGGAAGAAA TATCAGGAAC AAAAATAAAT CTCTTCAGAC CACCGTACGG TGACTATAAC
AATACTGTTA TTGACACATG CAACGAAATG GGGTGTTATC CTATTCAGTG GAATGTGGAC
AGTCTTGACT GGCGTAAAGA AATGAGCAGA CAGGCTATAC TGGACAGAAT TTTAAAAAGA
ACTAAGCCGG GTGCAATACT GCTATTTCAT AACGATACAC AGTATACAGC ACAGCTTCTC
CCTGAGATTA TAAAAGGACT TAAATCCCAG GGACTAACGT TTTTACCTGT ATCTCAGCTT
ATAATGAAAG ATAATTATTA CATAGATGAT CAAGGAAGAC AGCAGAGGAA AAAGTAA
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| Protein sequence | MKIRLLWAKA KNIPKKVMII FLLISALFVS IGYTAKSAGV FNPSKHLPIY SVETEQNAVS
ITFDCAWGAD DIPQILDTLK KDSIKATFFM VGQWAEKFPD AVKLMANEGH DIANHGYSHL
RMSTISKEKC KSEIEMCNKK LEEISGTKIN LFRPPYGDYN NTVIDTCNEM GCYPIQWNVD
SLDWRKEMSR QAILDRILKR TKPGAILLFH NDTQYTAQLL PEIIKGLKSQ GLTFLPVSQL
IMKDNYYIDD QGRQQRKK
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