Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0559 |
Symbol | |
ID | 7309429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 644903 |
End bp | 645589 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643607495 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002504921 |
Protein GI | 220928012 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.276329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGAA TACTTATTGT TGAAGATGAT AAGCTTCTTA ATGAAGGGAT ATCAATTGTA CTAAAAAAAC ATGGACATAC GGTTTTGTCA GGTTATTCCT ATAATGAAGC ATTATGTTTA TTTTTGAATA ACAACTTTGA ATTAATATTG CTGGATATAA ATCTTCCTGA TAGAAGTGGT CTAGAGCTTT GCAATGAAAT TCGGAAAAAA TCCGATGTTC CCATTATATT TATAACTGCT AATGACACAG AGCAGGATAT TGTTAATGGT TTTGTGAACG GCTGTGATGA CTACATTGCA AAACCATTCT CTCTGGAAGT AATGAACCGG CGTATTCAGG CGGTACTCAG GCGTACCGGA ACTGAAGACA AAAGCATTTT CCGCTCTGGT GAAATATCAA TAAACTATGA AAAGATGGTG GTTTCAAAGG GGAAGATATC ACTTAAACTG ACTGCTACAG AGTACAAATT ACTGACACTT CTTACTCAAA ACAGTGGGCA GGTACTGACC AGAGACATTA TCCTCCAGAG GCTTTGGGGC ACTGATGAAG CTTTTGTTGA TGAAAACGCT GTTAGTGTTA ACATGAGGCG GCTTCGTCAA AAAATTGAGG ATGATCCAAA AAATCCAAAA TACATAAAAA CTGTTTTCGG TATAGGTTAT ACCTGGGGAG AGGAGTCCTG CAGGTGA
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Protein sequence | MARILIVEDD KLLNEGISIV LKKHGHTVLS GYSYNEALCL FLNNNFELIL LDINLPDRSG LELCNEIRKK SDVPIIFITA NDTEQDIVNG FVNGCDDYIA KPFSLEVMNR RIQAVLRRTG TEDKSIFRSG EISINYEKMV VSKGKISLKL TATEYKLLTL LTQNSGQVLT RDIILQRLWG TDEAFVDENA VSVNMRRLRQ KIEDDPKNPK YIKTVFGIGY TWGEESCR
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