Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0530 |
Symbol | |
ID | 7309403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 617924 |
End bp | 619045 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607464 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002504892 |
Protein GI | 220927983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00176978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAG TTACTTATGA ATTAATAAAA ACCTGCAAGC AGACAGGTGC AAGATTAGGT AAGGTGCATA CACCTCACGG TTCGTTTGAT ACCCCTGTTT TTATGCCTGT CGGAACTCTT GCGACAGTAA AAGGTATGTC TCCTGAGGAA CTCAAGGAAA TAGATGCAAG AATCATTTTA AGCAACACAT ACCATTGCTA TCTGAGGCCC GGTCAGGATA TTGTAAAGCA GGCTGGAGGC CTGCACGGCT TTATGAACTG GGATAGACCA ATACTTACGG ACAGCGGAGG TTTTCAAGTT TTCAGCCTAA GCGGATTAAG AAAAATTACA GAGGAGGGTG TAACCTTCAG ATCCCATCTG GATGGTTCAA AACATGTATT TACCCCAGAA TCGGTAATGG ATATTGAGAA CGATCTCGGT GCAGACATTA TAATGGCTTT TGATGAATGT GCACCTTATC CGGCTGAGTA TGATTATGTA AAGAAATCGA TGGAGCGTAC TACAAGATGG GCAAAAAGAT GCAAGGAAGC TCATACTAAT ACAGAGAAAC AATCACTTTT CGGTATAATT CAGGGTGGTA TGTACAAAGA GTTAAGGATA GAAAGTGCTA ACCAACTAAA GGAATTGGAT TTTCCGGGCT ATGCAATAGG CGGATTAAGT GTAGGTGAGC CTGCGGAAAT AATGTATGAG GTACTTGATT ACACAGCTCC ACTCATGCCT GCCGATAAAC CGAGATATCT GATGGGTGTT GGAACTCCGG ACTACCTTAT TGAGGGAGCC ATAAGAGGTA TAGATATGTT TGATTGTGTG CTTCCTACCA GAATCGGAAG AAACGGAACA GTACTCACCA GTAATGGAAG GGTCATTATT CGTGATGCAA AATACTCAAG AGATTTTTCA AAGCTGGATC CAGAATGTGA TTGTTATGTT TGCCGCAATT ATTCAAGGGC GTACATCAGA CACCTTATCA AATGCGGAGA GCTTCTGGGC CTGAGGCTTA CAACCTGGCA CAACTTATAT TTTTTAATTA ACTTGATGAA ACAAGTAAGA CAGGCTATAA TGGATGATAA GCTTGCCAGT TTTAGGGATG AATTTTATCT GAAATATGGC TATACTAAAT AA
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Protein sequence | MAAVTYELIK TCKQTGARLG KVHTPHGSFD TPVFMPVGTL ATVKGMSPEE LKEIDARIIL SNTYHCYLRP GQDIVKQAGG LHGFMNWDRP ILTDSGGFQV FSLSGLRKIT EEGVTFRSHL DGSKHVFTPE SVMDIENDLG ADIIMAFDEC APYPAEYDYV KKSMERTTRW AKRCKEAHTN TEKQSLFGII QGGMYKELRI ESANQLKELD FPGYAIGGLS VGEPAEIMYE VLDYTAPLMP ADKPRYLMGV GTPDYLIEGA IRGIDMFDCV LPTRIGRNGT VLTSNGRVII RDAKYSRDFS KLDPECDCYV CRNYSRAYIR HLIKCGELLG LRLTTWHNLY FLINLMKQVR QAIMDDKLAS FRDEFYLKYG YTK
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