| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0521 |
|---|
| Symbol | |
|---|
| ID | 7309391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 600333 |
|---|
| End bp | 602069 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607451 |
|---|
| Product | GerA spore germination protein |
|---|
| Protein accession | YP_002504883 |
|---|
| Protein GI | 220927974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGTGG TAAAAAAATT AAGCAAATAC ATTATATATG ATGAAAAAAG CATAAAGCAT
GAATTTGAAT TGAAGGAAAA AAAGTCCTTA AATTGTGAGG AGGTTAGGAA CTCCGCTTCT
ATGGACACCT TTGGAAGTGA AAAGTTCAAG GATTATTTTG AAGAATGTCC TGTTGATGAT
GAATTTCTTG AAGAATCAGT ATCGGATGAA ATAGAGCATA ATAAGAGTAT TATGAAAAAA
ATATATAATA TCCCTGAAAA TAGTGATATT GTATATAGGG AATTTAATAT AACCGTTAAA
GATAAAAGCT TTCAGGCTTT TATAGTATTT ATAGACGGGA TGACAAACAG CAGCATTATA
AGTGACAATA TTCTCCAACC CTTAATGATC CTTTCAAACC TTGATATAAA AGAAGAGGCT
AAGGATGTAG GAGAATTCAT ATTCAACAGG CTGATACCAT TTAATCAGTT GAAAAAAGCC
AAGGATTTCA AAGAGATTGT AAGTAATATC AATTTCGGGG GTTGCACTAT ATTTGTGGAT
GGACTGGAAT ATGCATATAC AGCTGATACA AAAAAATGGG AACACAGAAA TGTGGGTCAG
CCAAATTCCG AAACTGTTAT AAGAGGTCCA CAGGAGGCTT TTAATGAACA GATAAGAGCG
AATACTGCCT TATTGAGAAA AATTCTCAAG GACAAGGACC TGACTATAAA GGGACTTACC
ATAGGTAAGA GAAGTAATAC TCCTTGTGCT GTTATGTACA TCCGTGATAT AGCAAATGAG
TCCTTGGTAC GTGAAGTATT AAAAAGGGTC AAAAGCATAG AGGTTGACTA TATATTTGAT
TCAGGTGAAC TGGAGCAACT ATTGGAAGAC AGTACCTTTC TGACAGCACC TCAGATATTT
GCCACAGAAA GGCCTGACAC TGTGGCAAGA ATGCTTGCAC AGGGGAATAT AGCCGTTATA
TTGGATGGAA GCCCGTATGT GCTTGTTATG CCTGCAACAA TAACAGAATA TCTCAGTACA
CCAGAAGATA TAAACATCAG ATTTCCCTAC GTGAATTTTG TCCGAATAAT AAGAATAATC
GGTGTTGCCA TAGCACTTCT GCTACCCGGG TTGTATATAG CAATAACAAA CTATCATCAG
GAAATGATTC CAACAAATCT TTTATTTGCC ATTGAGGCTT CAAGGGAGAT TGTACCGTTT
CCAACAGTTA TTGAAATATT GGTAATGGAA TTTTCATTTG AGCTGATAAG AGAAGCCGGA
ATTAGGGTAC CCGGAGCAAT AGGCTCTACA ATAGGTATTG TAGGAGGCCT GATTTTAGGT
CAAGCTGCCG TTGCAGCAAA TCTGGTAAGC CCTATACTGA TAATAGTAGT TGCAATTACG
GCACTTGGTT CCTTTTCTAT ACCTAGCTTC TCAATGTCCT TTTCTATAAG AATAATTCGG
TTTGCCTACA TTATTTTAGG AGCCATAGCA GGATTTTCTG GAATAGCATT AGGTCTGCTG
TTAAATGCCC TGCTCCTTGC ATCATCAAAA TCCTTTGGCG TACCTTTTTT GACTCCATTC
GGGCCTATAA CAAATGGGAA ATATTCAGAT AAGATATTGA GAAAACCAAT GTGGAAACAG
GAAAAAAGGC CGGATTATCT GAATACGAAA AATATCAAAA AGCAGCCTGA AATAAGCAGG
GGCTGGACTG TCGATGATTC AGGGGAGGAC GGAGGTAAAG ATAATGAGGA GCAATGA
|
|---|
| Protein sequence | MGVVKKLSKY IIYDEKSIKH EFELKEKKSL NCEEVRNSAS MDTFGSEKFK DYFEECPVDD
EFLEESVSDE IEHNKSIMKK IYNIPENSDI VYREFNITVK DKSFQAFIVF IDGMTNSSII
SDNILQPLMI LSNLDIKEEA KDVGEFIFNR LIPFNQLKKA KDFKEIVSNI NFGGCTIFVD
GLEYAYTADT KKWEHRNVGQ PNSETVIRGP QEAFNEQIRA NTALLRKILK DKDLTIKGLT
IGKRSNTPCA VMYIRDIANE SLVREVLKRV KSIEVDYIFD SGELEQLLED STFLTAPQIF
ATERPDTVAR MLAQGNIAVI LDGSPYVLVM PATITEYLST PEDINIRFPY VNFVRIIRII
GVAIALLLPG LYIAITNYHQ EMIPTNLLFA IEASREIVPF PTVIEILVME FSFELIREAG
IRVPGAIGST IGIVGGLILG QAAVAANLVS PILIIVVAIT ALGSFSIPSF SMSFSIRIIR
FAYIILGAIA GFSGIALGLL LNALLLASSK SFGVPFLTPF GPITNGKYSD KILRKPMWKQ
EKRPDYLNTK NIKKQPEISR GWTVDDSGED GGKDNEEQ
|
|---|
| |