Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0515 |
Symbol | |
ID | 7309386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 594208 |
End bp | 594624 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643607445 |
Product | protein of unknown function UPF0047 |
Protein accession | YP_002504877 |
Protein GI | 220927968 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0221734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCTT TCAGAAAAGA GTTGTTTTTT AATGTACCAC GCAGAAGAGC CTATATAAAC ATAACTCAAC AGGTGCAGCA GTGTATTGAT GAAAGCGGTA TTAAAGAGGG GATGGTTTTG GTTAATGCTA TGAATATTAC TGCAAGTGTT TTTATAAACG ATGACGAAGC CGGGCTTCAT GCAGATTTTG AAACATGGCT TGAAAAACTG GCACCTGAAA AGCCGTATAG TCAATATAAT CATAACGGTT ATGAGGACAA TGCAGATGCA CATTTAAAGA GGCAAATAAT GGGGAGGGAA GTAGTTGTAG CAATTACTAA AGGGGAGCTC GATTTTGGAA CCTGGGAACA GATTTTCTAT GGTGAGTATG ACGGAAAGAG AGAAAAAAGG GTTCTAGTGA AAATTATTGG AGAATAA
|
Protein sequence | MKSFRKELFF NVPRRRAYIN ITQQVQQCID ESGIKEGMVL VNAMNITASV FINDDEAGLH ADFETWLEKL APEKPYSQYN HNGYEDNADA HLKRQIMGRE VVVAITKGEL DFGTWEQIFY GEYDGKREKR VLVKIIGE
|
| |