Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0504 |
Symbol | |
ID | 7309378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 584605 |
End bp | 585348 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643607434 |
Product | Flp pilus assembly protein TadB-like protein |
Protein accession | YP_002504866 |
Protein GI | 220927957 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGACT ATAACGAATA TGCGATTCCG ACGAAAATGA AATTAGTATA TGCATTATCA GCTGCAACTG TTGTATTTGC CGTTTCCTAC CTGTTTTACC GGAGCTTTAC GGTTTCAATT GCAATAAGCC CTTTAGGTAT ATTTTATTTG AATTATAGAA GAAAACAAAT AATCGAAAAA AGAAAAAATG AACTAAATCT GCAATTTAAA GATTTACTCA TATCTCTATC ATCTTCTTTA TCAGCAGGAA AACCCTTGGA AAAGGCTTTT GTTGGTGCAC TTTCAGACCT TTATGTTTTG TATCCCAGCG ATGATGCATA CATAGTTAGA GAAACAAAAA TAATAATTAA TAAACTTTCT CTGAACGTCA GTATCGAAGA GGCCGTATCA GACTTTGCAG AACGTTCTGA TATAGATGAC ATAAAAAACT TTTCAGATGT TATTATAATA TGCAAAAGAA CAGGTGGAAA CCTTGTAGAT GCAATAAAGA ACTCGTCAAG AATAATAAGC GAAAAAATTG AAATGGCACA GGAAATAGAA ACATTGCTTT CATCCAGAAA ACTTGAGCAA AAAGTTCTTA ATATTATGCC TATTGCAATG ATTTTTATTT TATCAACAAC TGCCACAGAG TATATAAATC CGGTATTTAC TACTGTCACA GGCAGGATAG CAGCAACACT GTGTCTCATT CTTCTTACAG CTGCATATTT TATTTCAAAA AGGATTATTA ATATTAAAAT GTGA
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Protein sequence | MVDYNEYAIP TKMKLVYALS AATVVFAVSY LFYRSFTVSI AISPLGIFYL NYRRKQIIEK RKNELNLQFK DLLISLSSSL SAGKPLEKAF VGALSDLYVL YPSDDAYIVR ETKIIINKLS LNVSIEEAVS DFAERSDIDD IKNFSDVIII CKRTGGNLVD AIKNSSRIIS EKIEMAQEIE TLLSSRKLEQ KVLNIMPIAM IFILSTTATE YINPVFTTVT GRIAATLCLI LLTAAYFISK RIINIKM
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