Gene Ccel_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0504 
Symbol 
ID7309378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp584605 
End bp585348 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content32% 
IMG OID643607434 
ProductFlp pilus assembly protein TadB-like protein 
Protein accessionYP_002504866 
Protein GI220927957 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGACT ATAACGAATA TGCGATTCCG ACGAAAATGA AATTAGTATA TGCATTATCA 
GCTGCAACTG TTGTATTTGC CGTTTCCTAC CTGTTTTACC GGAGCTTTAC GGTTTCAATT
GCAATAAGCC CTTTAGGTAT ATTTTATTTG AATTATAGAA GAAAACAAAT AATCGAAAAA
AGAAAAAATG AACTAAATCT GCAATTTAAA GATTTACTCA TATCTCTATC ATCTTCTTTA
TCAGCAGGAA AACCCTTGGA AAAGGCTTTT GTTGGTGCAC TTTCAGACCT TTATGTTTTG
TATCCCAGCG ATGATGCATA CATAGTTAGA GAAACAAAAA TAATAATTAA TAAACTTTCT
CTGAACGTCA GTATCGAAGA GGCCGTATCA GACTTTGCAG AACGTTCTGA TATAGATGAC
ATAAAAAACT TTTCAGATGT TATTATAATA TGCAAAAGAA CAGGTGGAAA CCTTGTAGAT
GCAATAAAGA ACTCGTCAAG AATAATAAGC GAAAAAATTG AAATGGCACA GGAAATAGAA
ACATTGCTTT CATCCAGAAA ACTTGAGCAA AAAGTTCTTA ATATTATGCC TATTGCAATG
ATTTTTATTT TATCAACAAC TGCCACAGAG TATATAAATC CGGTATTTAC TACTGTCACA
GGCAGGATAG CAGCAACACT GTGTCTCATT CTTCTTACAG CTGCATATTT TATTTCAAAA
AGGATTATTA ATATTAAAAT GTGA
 
Protein sequence
MVDYNEYAIP TKMKLVYALS AATVVFAVSY LFYRSFTVSI AISPLGIFYL NYRRKQIIEK 
RKNELNLQFK DLLISLSSSL SAGKPLEKAF VGALSDLYVL YPSDDAYIVR ETKIIINKLS
LNVSIEEAVS DFAERSDIDD IKNFSDVIII CKRTGGNLVD AIKNSSRIIS EKIEMAQEIE
TLLSSRKLEQ KVLNIMPIAM IFILSTTATE YINPVFTTVT GRIAATLCLI LLTAAYFISK
RIINIKM