| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0478 |
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| Symbol | |
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| ID | 7309355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 546888 |
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| End bp | 549092 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643607408 |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_002504840 |
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| Protein GI | 220927931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2
[COG2815] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0121873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGGAG TAAATTTGAA GATTAAGAAA CGACTTTTGT TTATACTTTG TGTTTTTACA
ATAATGACAC TGATTCTCGT GTTAAGGATT GCCTGGATTC AAATATATAG CGGAAAAGAA
TATCAGGAGT TTGCATATAA TCAACAGACT AAAAACCGTA CTATTAGTGC AAAAAGAGGT
ACTATATATG ACCGCAATAT GAAACCTTTG GCGGTAAGCG GTTCGGTAGA TACTGTCAGT
GCAAGTCCTC AGGAGATATC AAAACAAAAA CTCGATATAG ACAAGATTTC CAGTGAACTT
GCTAATATAC TTGAAATGGA TAAGGAAACA GTTAAAAAGA AGCTCACTAA GAATAGCCAA
TATGAAATTA TAAAGCAGAA AATAGACAGG GAGATCGGCA ACAAAGTACG TGAGTGGAAA
TCAAAAGACA AAATATCCGG TATTTATATT GATGAAGACA CAAAAAGGTT TTATCCCAAT
AGAAATCTTG CCGCCCATGT TATCGGTTTT ACAAACATAG ATAATGACGG CCTTGATGGA
GTTGAAAGGA TGATGGAGAA ATATTTGAAG GGGGTACCCG GTAAAATACT CAGTGAAACA
GATGCAAGCG GTATGGCTTT GAGTATGAGT GACGAAAAGT TCATACAGCC CCAAGATGGA
AATGATGTTA TTCTTACAAT AGATGAAACA ATCCAGTATT TTGCCGAAAA GGCTTTGGAA
AAGGCAATTT CGGATAATAA TGTTTTAAAC GGAGCTACAG CCATAGTAAT GGACCCTAGA
AATGGTGAAA TACTAGCATT AGCATCAAAG CCCGATTTTG ACCTTAATAA CCCCAGAGGA
GTTCCAAAGG GAAAGGACCC TGAAACCTGG ACAGGAAAAA GCAAGGAAGA TGTAGAGTAT
CTTCAGCAGA CAGTTTGGAG AAATAAAGCA GTTGTTGATA CATACGAGCC GGGTTCCACA
TTCAAGCCGG TCACAGCAGC AGCGGGTCTG GAGGAGGGTG CTATTACTCC TGATACACAG
GTTACAGATG CCACTGTTAA GGTGGGAGGG TGGAACATAA ATTGTTGGAA ACCCAATGCT
CACTTACACG AAACTTTCAG AGAAGGCGTT TATAACTCGT GTAATCCTGT TTTCGTACGC
CTTTCCCAAA AATTGGGAGT ACCGTTATTC TTTAAATATG TAAAAGCCTT TGGTTTTTAT
GACAAGACCG GAATCGATCT TCCCGGTGAA GCACGTGGTA TAATGTTTAC AAACCCAACC
GAGGTAAACA TGGCTACAGC TTCCTTTGGA CAGCGTTTCC AGATAACACC CATACAGCTT
GTACAGGCAT ACGGTGCAAT TGCAAACGGA GGAGATTTGA TTACACCTCA TGTTGTTAAA
GAAGTGGTAG ATGAAACAGG TAGCGTAATT AAAAAATACG AGCCTAACGT TGTAAGAAGA
GTTATATCCA GACAAACCTC CGATACTTTA AAATCCATAC TGTATGGAGT TGTAGATGTT
GGTACCGGTA AAAATGCCAA GATACCGGGG TACAAAATCG GAGGAAAAAC AGGAACGTCT
GAAACAATAA TGGATCCAAA ACTTTTAAAA CTTAATATTG TTGGGAAAAA CAAGAGATAC
ATAGTATCCT TTTCTGCCAT TGCACCTACT GACAATCCAA GCTTATGCGT ACTGGTTGTA
CTTGATTACC CGGATGTGTA CAATCCCGGC GGAGGTATGT TGGTTGCTCC TGTTGTGGGA
AAGCTGATAG ATGATATTCT GAGCTATAAG GGAGTCGAAA AGGAATACAC TGAGCAAGAC
AAAAAAATGC TGCTTCAGGA GGTTCAGGTT CCTAATGTAA AGGGCAAAAC CGTAGAAGAG
GCGGTTAAAC TGTTGAAAGA AAGCAAACTA GAGTATAAAA TAGAAGGAAG CGACACTGAC
AAAAAGGCAA TTGTACAGGA TCAGACACCG AAATCATCCG CATTGCTTCA TGAAAGATCA
ATTGTGGTAC TTTATACCTA TAAACCTCAG GAGGAGGCAA TGGTTAAGGT TCCGGATGTT
AAGAATAAGC CAGTTTATGA TGCTACACAG GCTTTTAAGA AACTGGGACT TAATATTCGT
GTAAACGGTA CTGGAACAGC AGTAAGCCAG AGCATGGATG CAGGTACAAA AGTCAAAAAA
GGTACCGTAA TCGAAGTTAT ATTTAGGAAT GTAGTTTCGG ATTAG
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| Protein sequence | MAGVNLKIKK RLLFILCVFT IMTLILVLRI AWIQIYSGKE YQEFAYNQQT KNRTISAKRG
TIYDRNMKPL AVSGSVDTVS ASPQEISKQK LDIDKISSEL ANILEMDKET VKKKLTKNSQ
YEIIKQKIDR EIGNKVREWK SKDKISGIYI DEDTKRFYPN RNLAAHVIGF TNIDNDGLDG
VERMMEKYLK GVPGKILSET DASGMALSMS DEKFIQPQDG NDVILTIDET IQYFAEKALE
KAISDNNVLN GATAIVMDPR NGEILALASK PDFDLNNPRG VPKGKDPETW TGKSKEDVEY
LQQTVWRNKA VVDTYEPGST FKPVTAAAGL EEGAITPDTQ VTDATVKVGG WNINCWKPNA
HLHETFREGV YNSCNPVFVR LSQKLGVPLF FKYVKAFGFY DKTGIDLPGE ARGIMFTNPT
EVNMATASFG QRFQITPIQL VQAYGAIANG GDLITPHVVK EVVDETGSVI KKYEPNVVRR
VISRQTSDTL KSILYGVVDV GTGKNAKIPG YKIGGKTGTS ETIMDPKLLK LNIVGKNKRY
IVSFSAIAPT DNPSLCVLVV LDYPDVYNPG GGMLVAPVVG KLIDDILSYK GVEKEYTEQD
KKMLLQEVQV PNVKGKTVEE AVKLLKESKL EYKIEGSDTD KKAIVQDQTP KSSALLHERS
IVVLYTYKPQ EEAMVKVPDV KNKPVYDATQ AFKKLGLNIR VNGTGTAVSQ SMDAGTKVKK
GTVIEVIFRN VVSD
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