Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0469 |
Symbol | |
ID | 7309346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 537942 |
End bp | 539159 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643607399 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002504831 |
Protein GI | 220927922 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA TTGAGAGCTT TAAACAGGCT TTATCAAGTC TTAGAGCAAA CAAGCTCCGT TCCGTCCTGA CAATGATTGG TATAATTATG GGTGTGTTTT CGGTTATAAC TATCGTTGCA ATCGGAAATG CTACGCAGAG CTATGTGGAC AGTGAATTTG CCAAAATAGG AGCTAATATA CTGATTGTAT CTTACAAGAC AAGCAGCTTA AATACCAATG ATATGCTGAA AAGTGACGAT TTGAAGGCGA TAAGTAAAAG TGTTAAAGAA ATAAAGAATG TCGGAACGGA CATTAACAGA TCCGGAACCA TCCGCCTTGA TAACAAAACA AGAAATGCTA GTATAAACGG TATTTCATCA CAGTACAAGG ACATTGTTCC CGTTGAAATG GCACAGGGCA GAATGATAAA TGAAATTGAC AACTCTACAA GATCAAATGT TGTTGTTATT GATGAGGAGT TTGCAAAAGC CAATTTTGGG AATCAGGACC CGATAGGGCA AAAACTTAAG GTTACTCTTG GCTCCGGGAG TACTCTAAGG TTAAGGGTGG TAGGAGTAAC TAAAATTGAA GAAACTCCGT TTGGTGGGAT GATCGATAAC GAAAGCAGGC CGGTAAGGCT TACCATTCCT ATGACTACAC TTCAGTCATA TCATCCTGAT TCTGACCAGT TCAACTATAT TTATGTTTCA GTAGATGAAA AGGATAAGAC TGTTCTGAAA AAAATAGCTG ATAAGATAAC AAAAACCCTT GAAAGCAAGC ATGGGAATAA GGATAAATAT TCCATACAAT TTTATTCTGA CTTTCAGGAT GGTTTGAATA CAGTACTCAA TGTAATATCT TCAGTACTTC TGGTTATAGC CGTAATTACA TTGATTGTAG GAGGTATAGG CATCGTAAAT ATACTTCTGG TTTCTGTTAC AGAGCGTATC AGGGAGATAG GTGTAAGAAA GGCTCTTGGG GCCAGAAAGC GGGATATAGT AGTACAGTTT ATAACTGAAT CTATTATTCT TACGGGGATA AGCGGTGTAA TTGGTATTAT TATGGGGATT CTAGGGGGAT TTATAATTTC TTCCCTTGTA AAAATTCCAC CGGTTCTGAA CATTCAGGTA ATAGTACTTG CTTTTCTGGG ATCTATTGCT CTGGGTCTGT TATTTGGAGT TTATCCTGCA AAGAGGGCAG CAGACCTTGA TCCGATAGAA TCACTGAGAT ACGAATAA
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Protein sequence | MNIIESFKQA LSSLRANKLR SVLTMIGIIM GVFSVITIVA IGNATQSYVD SEFAKIGANI LIVSYKTSSL NTNDMLKSDD LKAISKSVKE IKNVGTDINR SGTIRLDNKT RNASINGISS QYKDIVPVEM AQGRMINEID NSTRSNVVVI DEEFAKANFG NQDPIGQKLK VTLGSGSTLR LRVVGVTKIE ETPFGGMIDN ESRPVRLTIP MTTLQSYHPD SDQFNYIYVS VDEKDKTVLK KIADKITKTL ESKHGNKDKY SIQFYSDFQD GLNTVLNVIS SVLLVIAVIT LIVGGIGIVN ILLVSVTERI REIGVRKALG ARKRDIVVQF ITESIILTGI SGVIGIIMGI LGGFIISSLV KIPPVLNIQV IVLAFLGSIA LGLLFGVYPA KRAADLDPIE SLRYE
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