| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0466 |
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| Symbol | |
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| ID | 7312105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 535022 |
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| End bp | 535750 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643607396 |
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| Product | ABC transporter related |
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| Protein accession | YP_002504828 |
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| Protein GI | 220927919 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.492802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATTATAT CAATAAAGGA TTTAGGTAAG GTTTATAAAA ATGGGCAGAT AGAGGTTGAG
GCGTTAAGAA ATGTCGATGT AAATATTGAC AAGGAAGAAT TTGTTGCAAT AATGGGGCCG
TCCGGGTCAG GAAAATCAAC GTTAATGAAT ATTATAGGCT GCCTTGACAA ATCCACTACA
GGGGAATATT GGCTGGATGG AGTTAATATT TCTACGCTTA ATGAAACTGA ACTGGCAAGG
GTAAGAAACC GTAAAATAGG TTTTGTTTTT CAATCGTTTA ATTTGCTTCC AAGAATTACT
GCCCTGCAAA ACGTTGAACT TCCAATGATA TATGCCGGGG TAGGTGCAAA GGAGAGGCGT
AAAAGAGCTA TGTTGGCATT GGAGAGGGTC GGACTTGAGA AAAGAGTGCA TCACAAGCCA
AACGAAATGT CTGGAGGACA GAAGCAGAGG GTTGCTATAG CAAGGTCCCT TGTTAATTCT
CCTGCCATTA TACTTGCTGA TGAACCGACA GGTAACCTTG ATAGTACGGC TGGAGAAGAA
ATAATGACAG TATTTCAGGA CTTGAACCGG GAAGGAGTTA CTATTGTACT TGTAACTCAC
GAGCCGGACA TTGCAGAGCA TACTAAAAGA GTATTACGAT TTAAAGACGG TATGCTAAGA
AGCGATGAAA TAGTCCAAAA CCCACTTGAT GCAAGAAGTG TATTAAGTCA GTACAAGGAA
GAAGCCTAG
|
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| Protein sequence | MIISIKDLGK VYKNGQIEVE ALRNVDVNID KEEFVAIMGP SGSGKSTLMN IIGCLDKSTT
GEYWLDGVNI STLNETELAR VRNRKIGFVF QSFNLLPRIT ALQNVELPMI YAGVGAKERR
KRAMLALERV GLEKRVHHKP NEMSGGQKQR VAIARSLVNS PAIILADEPT GNLDSTAGEE
IMTVFQDLNR EGVTIVLVTH EPDIAEHTKR VLRFKDGMLR SDEIVQNPLD ARSVLSQYKE
EA
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