Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0441 |
Symbol | |
ID | 7309322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 506116 |
End bp | 507456 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607371 |
Product | MATE efflux family protein |
Protein accession | YP_002504803 |
Protein GI | 220927894 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000223642 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTATACCA ATAAGGATTT ATTACGCCTC TTTTTTCCTG CTCTGACCGA ACAGTTTCTT TCTACAGCGA TAGGTGTAGT AAATACTATG ATGGTAAGCG GGTTGGGGGC ATTTGCAGTA TCAGCAGTAG GAATAGTCGA TTCAATCAAT TTTGTAGTAA TGAATCTGTT TGTAGCTGTT TCCACAGGGG CTACAGTTAC CATAGCACAG CATCTGGGAG CTTCAAACAG AGAGGACGCA TCTAAAACCG CATCTCAGGC AATAACAGCT GTTCTTATAA TGTCAATAAT AGCCGGACTG GGACTATACA TATTCGGAAA CCAGATAATA AATTTCCTTT TTGGAGATGC CGAAAAAATA GTTAAAACGG CTGCCAGAAC ATATATGATT TGTTCAGCTA TTTCATATCC CATACTTGGA CTATTTGACG TATGTACGGG AATATTAAGG GCAAGCAATA ATTTCAGAGC TGCAATGTAT GCTGTTGTCG CATCAAATCT GGTTAATTTT TTGGTAGGTG CTCTGTTCAT TTTTGTTTTT GATTTCGGTG TACTGGGAGC CGGAATTGGC TTGATTTGTG CAAGACTGAC GGGAACAATT ATTGTAGCAT ATTCCATATG TAAGTCACAT CATTTGGATG TTCTGCGTAG TTCTTTCAAA ATTAAATACA AAATATTGAA GCCTGTATTA TATATTGGAC TTCCGGCTGG GATAGACAGT CTGGTTTTTA ACGGTGGAAA GCTTTTGGTG CAAGCAATAG TTGCGTCCCT GGGAACAGCT GCACTTGCCG CAAACAGTAT TGCAGGTTCT ATTAACTCAC TGCTGAACAT ACCCGGGAAT GCAATGACAA TAGTAGCAGT GACAGTAGTA GGTCATTATG CCGGAGCCGG GTTGAAGGAA GAATTAAACA AGATCATGAA GAAACTCATG GTTTACGCTA TGTTACTGCT GGGTGCGGTT TCATTAATAT TTTTCCCATT TGTACACCAC TTTTTGAAGC TTTATTCGCC TGCACCGGAC GTTGCAAGCC TAGCACTAAA TATAACATAT CTTACGCTCA TATGTATACC GGTTTTCTGG CCTGCGGCAT TCCTTCTGCC TTCGTGTCTG AGAAGCACAA GGGATGTTAT ATTTGTAACG ATTGTTTCCA TAATGAGTAT GTGGATTGTA AGGGTTTTCG GAGGTTATAT GTTGGTAAGG TATACAGGCC TGGGACTTAT GGGAATCTGG ATTGCCTGGT GCTTTGACTG GGTAACAAGG GGAATTCCGT TTCTGGAAAG AGTGGCTGCA AAACGTTACG AAAAGTATTT ACCCAAAACA AATAGTGAAC CATCTTCATA A
|
Protein sequence | MYTNKDLLRL FFPALTEQFL STAIGVVNTM MVSGLGAFAV SAVGIVDSIN FVVMNLFVAV STGATVTIAQ HLGASNREDA SKTASQAITA VLIMSIIAGL GLYIFGNQII NFLFGDAEKI VKTAARTYMI CSAISYPILG LFDVCTGILR ASNNFRAAMY AVVASNLVNF LVGALFIFVF DFGVLGAGIG LICARLTGTI IVAYSICKSH HLDVLRSSFK IKYKILKPVL YIGLPAGIDS LVFNGGKLLV QAIVASLGTA ALAANSIAGS INSLLNIPGN AMTIVAVTVV GHYAGAGLKE ELNKIMKKLM VYAMLLLGAV SLIFFPFVHH FLKLYSPAPD VASLALNITY LTLICIPVFW PAAFLLPSCL RSTRDVIFVT IVSIMSMWIV RVFGGYMLVR YTGLGLMGIW IAWCFDWVTR GIPFLERVAA KRYEKYLPKT NSEPSS
|
| |