Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0413 |
Symbol | |
ID | 7309295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 470718 |
End bp | 471698 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643607345 |
Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_002504777 |
Protein GI | 220927868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.531296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAA AGGAAAAAAT TTCTGAAGTT ACTTTTTCAA ATGAAGTCGG AAATACTAAA ATGGTTAAAA TAGCTAACCT CTTAAAAAAC TCTAGTAGTA ATATTTATGC GAAATGCGAA TACCTAAATC CGTCTGGAAG TCATAAAGAT AGAACCTTTA ACTATATTAT AGAACAACTT GAAAAAAGAG GAGAAATATC CCCAGGTATG ACATTAGTTG ATTGCTCCAC AGGCAATGGA GGCGGTGCTT TAGCTCGATG CGGTAAATTA AAAGGTTATA AGATTATTGT GTTTATGCCT GAGGGAATGA CAGAAGAACG TATTAGTCAG ATTAAAAGTT TTGATGCCGA AATTATTGAA ACTCCTAGAG AAAAGTTTTT AAACGGTTCA GTTGAAGCTG CTGGAGAATA TGCAAGAATA CACGAAAATT GTTATTTTCT TGATCAAGCA TCTAATCCGC TTAATCGTGA AGCTTGGGAT AATTGTGGTA AAGAGATAGT TAAATCCTTT GATTCTTTAG GAGAAAAAGT CGATTATTTT ATTTGTGCTA TTGGAACGGG AGGAACATTT TCAGGTATAG CCAAACAATT AAAAATTTAC TATCCGGATA TTATTACTGT AGGGATTGAA GTTGACAAAT CAGCTCCACT TTTTTCTAAG CGACATAATA AAGAATTTAA ACATAAGCAT CATAACATGA TGGGTTTGGG AGCCGGAGTG CTTTCTTCGA ATACTGATGA AAATTTAGTT GACATAATTG AGACAGTATC TGGTGAAGAT TCTTGGACAA TGATGAAAAA AGTAATTCAA GACGAAAATC TACAAATAGG CCCTACTTCT GGTGCTAATA TTCTTATGAG CTTAAAATAT GCAAAGGAAT ATGGTAGTAA AAATATAGTA ACAGTATTAT TTGACTCTGC TTGGAAGTAT TATAGCCGTT GGGATGGGGT CTATCCCGAA TATCAAAATT TAAATTTATA A
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Protein sequence | MSLKEKISEV TFSNEVGNTK MVKIANLLKN SSSNIYAKCE YLNPSGSHKD RTFNYIIEQL EKRGEISPGM TLVDCSTGNG GGALARCGKL KGYKIIVFMP EGMTEERISQ IKSFDAEIIE TPREKFLNGS VEAAGEYARI HENCYFLDQA SNPLNREAWD NCGKEIVKSF DSLGEKVDYF ICAIGTGGTF SGIAKQLKIY YPDIITVGIE VDKSAPLFSK RHNKEFKHKH HNMMGLGAGV LSSNTDENLV DIIETVSGED SWTMMKKVIQ DENLQIGPTS GANILMSLKY AKEYGSKNIV TVLFDSAWKY YSRWDGVYPE YQNLNL
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