Gene Ccel_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0380 
Symbol 
ID7309262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp433147 
End bp434406 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content36% 
IMG OID643607308 
Producthistidyl-tRNA synthetase 2 
Protein accessionYP_002504745 
Protein GI220927836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAT GGAAGATATA TACACCTGAT GGTGTACAGG ATATCCTGTT TGATGAATGT 
TACAAAAAAA GAGAAATAGA AAAAAGAATA AGAAACACAT TCAGGTCATA TGGCTATTAT
GAGATAGAAA CTCCTACAAT AGAATTTTTT GATGTATTTT CATCAGAGAT AGAGCATTTT
CCACAGGAAT CAATGGTAAA GTTCTTTGAT CAGAAAGGAA GAATTCTTGT ATTAAGGCCT
GACATAACAG TTCCGGTCGC AAGGATAACT GCCACAAAAA ACAGAGATGT TCAGGTGCCT
ATAAAGTATT CCTATATAGG AAATGTTTTC AGGTTTAACG AAGTCGGAGG CGGTCGTCAG
AATGAGTTTA CACAGGCCGG GGTTGAGATG TTAGGTGATT CTTCATCAGA GAGCGATGCA
GAAATAATCG CTATGGCAAT AAACACACTG AAATCTGTCG GCCTAAAAGA ATTCAAAATA
GAAATCGGGC AGGTTGAATT TTTTAAAGGA TTGGCTGAGG AGGCAGGATT TTCAAATGAG
GATATAGATG CTATATCAAA ACAAATAGAC AAAAAGGATC TTGTAGGTGT AGAAGAAATA
CTCAACCGAT ATGATATAAG TACAGAACTT AGGGAAATCG TTTTGAAGCT TACCGGATTA
TTTGGATCGG TTGACGTAAT TAAGGAGTTT AAAAAAGCTT CAATTAACGG CAGAAGTCTC
AAAGCAATTG AAAATGTAGA GGAAGTAGTA TCTATATTGT GTGATTATGG TTTATCGGAA
TATGTATCGA TAGATCTGGG AATGTTAAAA AGTTTGAATT ACGATACTGG AATAACCTTT
CGAGGCTTTA CAAACGGAGT GGGCTTCCCG ATACTTTCAG GAGCAAGATA CGATAACCTT
ACGTCCAGTT TTGGGAAGGA GTGTCCTGCT ACAGGCTTCT CATTAAGGAT AAATATGCTT
ATGACAGCAA TGGAAAAGGC GGGTCATACC TTTGAAAGAC CTTCTGTGGA TTCATTAGTA
TGTTATGAAA AAACGAACAG GAAAAGGGCA ATAGAAATAG CAGAAGCCCT CAGAAAGCAG
GATATGAAAA TAGAAACCTT TGTTTTGACT AAAGGTATCG ACCAGGCAAA AAAATACGCT
GCTTCAAAGA AAATCGGCGG AATTATATAT ATTAGAGACA ACGATAAAAT CACCGTATAC
GATATAAAAA ACAATATAAC AGAAGAAACC AGCTTCGATA CCCTATTAAA CAATCAATAA
 
Protein sequence
MSRWKIYTPD GVQDILFDEC YKKREIEKRI RNTFRSYGYY EIETPTIEFF DVFSSEIEHF 
PQESMVKFFD QKGRILVLRP DITVPVARIT ATKNRDVQVP IKYSYIGNVF RFNEVGGGRQ
NEFTQAGVEM LGDSSSESDA EIIAMAINTL KSVGLKEFKI EIGQVEFFKG LAEEAGFSNE
DIDAISKQID KKDLVGVEEI LNRYDISTEL REIVLKLTGL FGSVDVIKEF KKASINGRSL
KAIENVEEVV SILCDYGLSE YVSIDLGMLK SLNYDTGITF RGFTNGVGFP ILSGARYDNL
TSSFGKECPA TGFSLRINML MTAMEKAGHT FERPSVDSLV CYEKTNRKRA IEIAEALRKQ
DMKIETFVLT KGIDQAKKYA ASKKIGGIIY IRDNDKITVY DIKNNITEET SFDTLLNNQ