Gene Ccel_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0346 
Symbol 
ID7309233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp399663 
End bp400448 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content41% 
IMG OID643607275 
ProductSCP-like extracellular 
Protein accessionYP_002504712 
Protein GI220927803 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.557826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GGAAAAAAGC AGCAATAGTA TTGATTGTTT TAGTTTCAGC GTTTACTCTT 
TTACCTATTG GTACTTTACA GTACAGAGTA GATGCTTCAC AGTCATATCA AAACTTGGCC
TCATCGGCAG GAATGATTAC GGCACAGGAT GTTAACCTGC GTACCGGCCC TAATACTAAG
TTTGACAGTC TTTACAAACT GAAAAAAGGT CATAAGTTAA CGGTCATGGG AAAGCTTGGG
GACTGGTATG CGGTTTATGA CAGTGCCAAT GGAAATATCG GTGCAGTATC AGCCCGGTAT
TTGAAAGTAG CTCAGCCAAA AGCAGTAGCA AAGGCAAAGA AGGTCAATAC AGTTAAGAGT
AACTCTAATG AAACCGTACA GAAGGCTGTG GCAGCTAAAG TTATAGATGT CTCGCCTGAT
GAAAAGGCCT TATTGGATAT GGTTAATAAC GCCAGAAGGG AAGAGGGATT GAATCCTCTG
ACCATTGATG AAAATCTGGT GAAGATAGCC AGACTAAAGG CCACTGATAT GAAAAATAAC
AATTACTTCA GCCACACGTC TTCATATTAC GGAACTCCCT TTGATATGAT GAAAAAATAC
GGAGTAAAGT TCAGTATTGC AGGTGAGAAC CTTGCGGGCA ATCAGTCCAT GGAGAAGGCA
CTGACAGCAT GGCTTAAAGA AAACGGAAAC AATCTGTACA ACAAAGAATT TACCCACACA
GGTATAGGTG TTGTGGAGAG TCCCACATAC GGTAAGTTAT TTGTGGAAAT GTTTATGAAG
AAGTAA
 
Protein sequence
MKKRKKAAIV LIVLVSAFTL LPIGTLQYRV DASQSYQNLA SSAGMITAQD VNLRTGPNTK 
FDSLYKLKKG HKLTVMGKLG DWYAVYDSAN GNIGAVSARY LKVAQPKAVA KAKKVNTVKS
NSNETVQKAV AAKVIDVSPD EKALLDMVNN ARREEGLNPL TIDENLVKIA RLKATDMKNN
NYFSHTSSYY GTPFDMMKKY GVKFSIAGEN LAGNQSMEKA LTAWLKENGN NLYNKEFTHT
GIGVVESPTY GKLFVEMFMK K