Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0346 |
Symbol | |
ID | 7309233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 399663 |
End bp | 400448 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607275 |
Product | SCP-like extracellular |
Protein accession | YP_002504712 |
Protein GI | 220927803 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.557826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GGAAAAAAGC AGCAATAGTA TTGATTGTTT TAGTTTCAGC GTTTACTCTT TTACCTATTG GTACTTTACA GTACAGAGTA GATGCTTCAC AGTCATATCA AAACTTGGCC TCATCGGCAG GAATGATTAC GGCACAGGAT GTTAACCTGC GTACCGGCCC TAATACTAAG TTTGACAGTC TTTACAAACT GAAAAAAGGT CATAAGTTAA CGGTCATGGG AAAGCTTGGG GACTGGTATG CGGTTTATGA CAGTGCCAAT GGAAATATCG GTGCAGTATC AGCCCGGTAT TTGAAAGTAG CTCAGCCAAA AGCAGTAGCA AAGGCAAAGA AGGTCAATAC AGTTAAGAGT AACTCTAATG AAACCGTACA GAAGGCTGTG GCAGCTAAAG TTATAGATGT CTCGCCTGAT GAAAAGGCCT TATTGGATAT GGTTAATAAC GCCAGAAGGG AAGAGGGATT GAATCCTCTG ACCATTGATG AAAATCTGGT GAAGATAGCC AGACTAAAGG CCACTGATAT GAAAAATAAC AATTACTTCA GCCACACGTC TTCATATTAC GGAACTCCCT TTGATATGAT GAAAAAATAC GGAGTAAAGT TCAGTATTGC AGGTGAGAAC CTTGCGGGCA ATCAGTCCAT GGAGAAGGCA CTGACAGCAT GGCTTAAAGA AAACGGAAAC AATCTGTACA ACAAAGAATT TACCCACACA GGTATAGGTG TTGTGGAGAG TCCCACATAC GGTAAGTTAT TTGTGGAAAT GTTTATGAAG AAGTAA
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Protein sequence | MKKRKKAAIV LIVLVSAFTL LPIGTLQYRV DASQSYQNLA SSAGMITAQD VNLRTGPNTK FDSLYKLKKG HKLTVMGKLG DWYAVYDSAN GNIGAVSARY LKVAQPKAVA KAKKVNTVKS NSNETVQKAV AAKVIDVSPD EKALLDMVNN ARREEGLNPL TIDENLVKIA RLKATDMKNN NYFSHTSSYY GTPFDMMKKY GVKFSIAGEN LAGNQSMEKA LTAWLKENGN NLYNKEFTHT GIGVVESPTY GKLFVEMFMK K
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