| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0335 |
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| Symbol | |
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| ID | 7309223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 386508 |
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| End bp | 388442 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643607264 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_002504701 |
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| Protein GI | 220927792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01577] oligosaccharide amylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT CATATTATAA CAACGCAATT ACCGGAAATT CTTCAATGCT GGCATGTTTT
AGTGAAAGAG CTGAACTTTT AAGACTTTTT TGGCCCGATA TTGATTATAT CCAGAATTTG
GATAAAATGT TTCTTGGACT ATTTGAGAAA AATAAAACAG GAAGCACTGT CTGGCTTAAT
GACATCCGGT GTGAACATCA TCAGGAATAC CTTCCTGATT CTAATATAAT TAAAAACATG
GTTACAAATT TTTTTGACGG ATACAAGGTA GTACTATATG ACTTTGTACA TCCTGAAATG
GATGTTTTGG TACGAAGATT TGAAATAGAG AATTTACGCG GCGAGAGCAG GGAATTGGGA
CTAATGAGTT TTTCAGCCGC CACCAGCAGT GATTCAGAGG TGGCATGCAG CTTGTTTGAT
TTCATGAATG AAGCACTGGT TCATTATAAG CCGGACAGCT ATATTGCCGT TACATCAGAT
ATTCCTGTAT ACCAGTTCCA AATCGGTAAT AATGCCAATG ATGCCGCTGT TAATACATAT
CTGTATGGCA AGGACGATAT AGGAATGATG AAGGATGCGG CCATATCATG GGATCTGGGA
GTTTTTCAGC CTCATGCTGT AAAGACTACA AATGTATATC TATGTGCGGC AGATACCCTG
AAATCCTGTA AAGCTCTTGT AAGAAGAGTA AAAACAGTAG GAGGGCTTAC AGCCTTCAGA
GAGACAGGGC GGTACTGGAA GGATTATCTG GAGAAAACAA CTAAATTAAA ATCAGGTAAC
ACTCTTTTGG ATGACTTATA TAAAAGATCC CTGCTTGTAT TCAGACTGAT GTATAGTAAA
AAAAGCGGCG GATTGATGGC TGCACCTGAA GTTGATGAAT ATTTTACAAA ATGCGGGAAA
TATGCCTATT GCTGGGGAAG GGATGCGGCC TTTATAACAG GTGCACTGGA CATTGGAGGA
TTGTGCGAAA GTGTTGACCA TTTTTATAAA TGGGCTGTAA ACGTTCAGGA TGAGGACGGG
AGCTGGCAGC AGAGATATCA TATGAACGGT AATTTAGGTC CCTGCTGGGG GCTTCAGGTG
GATGAGACAG GGACAATAAT CTGGGGAATG TTGAACCACT ATAACTATAC AAAAAATACA
GACTTTCTGA AATCCGTGTG GGATAGTGTA AAAGCGGCCG CAGATTTCCT TGTGAGGTTT
ATAGACAGTG AAACAGGTCT CCCAAGGCCC AGCTTTGACT TATGGGAAGA GAGATATGGA
GAACATGCAT ATTCCTCGGC TTCCGTATGT GCAGGACTCA AGTCTGCATC AGAAATGGCA
CGTATACTGG GAAAACCTTC CCAAGAATAT ATTCAATGGG AGACAACAGC AGACAGTATT
AAAAAGGCAA TAGTTAAATA CTTTTGGAAA GAAGATTACA GACGTTTTAT CAGAAGCATA
CGGGTAAAAT TAAACGGCTT CGGGCAGGAG CCTTCTTCTG ATACTATGCT GATTAAGGTA
AATCCAAAGG GCTATGTAAG GGATGTAACA AAAGAGGATT GGATTGTAGA TGTAAGCCTT
GTTGGATTGG GTATTCCCTT TGAAATTTTT GAGTTGAATG ATCCAATGTT GAGGGATACA
GTTTCATTAA TTGAACAAGT CCTTACGGCA CAAGGAGTTG GCGGAATAAA AAGATATGAA
AACGACACAT ATATAGGCGG AAATCCGTGG ATTCTTACCA CCCTTTGGAT AGCATTGTAC
CATGCTAAAT CAGGAAACTA TAAAAAAGCA AAGGAATATC TGATATGGGC TGCAAGTGGA
AAAACAGAAC TGGGTCTGCT GCCGGAACAG ATTAACAGGG ATACGGGAAA ACCAGAATGG
ATAATTCCGC TTACATGGTC TCACGCAATG TACGTGCACG TTTATTCAGA GCTTATAAAT
GCGGGTGTAC TGTAA
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| Protein sequence | MQKSYYNNAI TGNSSMLACF SERAELLRLF WPDIDYIQNL DKMFLGLFEK NKTGSTVWLN
DIRCEHHQEY LPDSNIIKNM VTNFFDGYKV VLYDFVHPEM DVLVRRFEIE NLRGESRELG
LMSFSAATSS DSEVACSLFD FMNEALVHYK PDSYIAVTSD IPVYQFQIGN NANDAAVNTY
LYGKDDIGMM KDAAISWDLG VFQPHAVKTT NVYLCAADTL KSCKALVRRV KTVGGLTAFR
ETGRYWKDYL EKTTKLKSGN TLLDDLYKRS LLVFRLMYSK KSGGLMAAPE VDEYFTKCGK
YAYCWGRDAA FITGALDIGG LCESVDHFYK WAVNVQDEDG SWQQRYHMNG NLGPCWGLQV
DETGTIIWGM LNHYNYTKNT DFLKSVWDSV KAAADFLVRF IDSETGLPRP SFDLWEERYG
EHAYSSASVC AGLKSASEMA RILGKPSQEY IQWETTADSI KKAIVKYFWK EDYRRFIRSI
RVKLNGFGQE PSSDTMLIKV NPKGYVRDVT KEDWIVDVSL VGLGIPFEIF ELNDPMLRDT
VSLIEQVLTA QGVGGIKRYE NDTYIGGNPW ILTTLWIALY HAKSGNYKKA KEYLIWAASG
KTELGLLPEQ INRDTGKPEW IIPLTWSHAM YVHVYSELIN AGVL
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