| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0294 |
|---|
| Symbol | |
|---|
| ID | 7309188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 337422 |
|---|
| End bp | 340148 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643607224 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_002504661 |
|---|
| Protein GI | 220927752 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAA CAGAATCCAT GCTTGACTTT ACTAACCCCG ACAACCTTTT ATCAAAGGGC
CTTACTGATA AGGAGGCCAG AAGAAAGCTA GAAAAGCACG GACCCAATCT GTTGTCGGAA
AGAAAAAGAA TTTCCCCGAT TAAAATCCTG TTTGAACAGT TTACTGATTT AATGGTTATA
ATCCTTATGA TTTCAACTGT TATTTCTGGT TTTATGGGTG AAATGACAGA AGCAATTACA
ATAATAGCAA TAATAGTAGT AAATGCCATA ATGGGATTTG TGCAGGAGTA CAGGACCGAA
AGAACCATGG AGGCGTTAAA ATCTCTTGCG GCACCCTATG CAAAGGTCAT CAGAAATGAG
CAGCAGGCAA GTATACCTGC GGAGGATATA GTTCCAGGAG ATGTTATTGT CCTTGAAACG
GGGGACAGGA TAGCAGCAGA TGCGGCCATA CTTGAATGTA ACAGCCTTCA CATTGACGAA
TCGCTTTTGA CTGGTGAATC ACTGCCGGTT GAAAAACACC AGTTAAAGAA CAAAAATGTC
TTGATGGACC CATTTGATAA GAAATCCTCT GTATATATGG GAACAGTTGT AACTGGAGGA
AGAGCTAAAG CAGTAGTATA TGCTACGGGT ATGAAAACTG AAATGGGCAG CATAGCCGAC
ATGATTCAGA ATATAGAGGA CGACGAAACT CCTCTGCAAA AGAGGTTGGG GCATCTCGGA
AAATTTATAG CCGTAGGGTG TCTGATTATA TGTGCAATAG TATCGTTTAC GGGAATAATA
AGAGGCGAAA AGCTTTTCAA CATGTTATTG TCAGGAATAA GTCTGGCAGT TGCGGCCGTT
CCAGAAGGAT TGCCTGCAAT TGTTACTATT TCTCTTGCAT TGGGTGTCCA GAGAATGCTA
AAAAGAAATG CACTTATACG CAAGCTGCCA GCGGTAGAGA CTCTTGGCTG TGCAAGCGTT
ATTTGTTCTG ACAAAACAGG AACCCTTACT GAAAATAAAA TGACAGTGAG GAAAATGTAT
GCATCAGGCT ATCGGCTTGA CATAACAGGT AATGGTTACA ATCTGGAAGG GAATTTTCTT
GTTGATAACA AGCCTACTGA CCCGGTCAGG GTTGATGGAA TAAGGCTGGC ATTAGAAATA
GGTGCATTAT GTAATAACTC AGTAATTTCG CATCCTGTGC CGGAGCATAC GACGGTGGGA
AAAATTAAAT CAATTTTTTC AAAGCAGGAA AGCTTCAAGA TTTCTGGTGA CCCTACAGAA
ATTGCTTTGA CCATAGCTGC GGCGAAGGCA GGAATAAACG AAACCTATCT GAAAAGATCA
TATAAACGTA TTGATGAGAT ACCCTTTGAC TCAGAAAGAA AATGTATGTC CATTATATGT
AAAAATAATT GCGGAGAGCT GCTGGTATTC ACAAAAGGAG CACCTGACGT GATTATTGAT
AAGTGCAGCA GGATATTATC GTCACGAGGT GTTATCAAAC TGGATGAGCT GACCAGAAGA
TCAATAATAA AGCTTAATGA TACAATGGCT AATGACGCTT TGAGAGTTAT AGGGGTAGCA
TACAGAAAAC TTGAGACCGG TAAATATAAT CCGGGTAAAA CAAATATTGA AAATGAACTT
ATTTTTGTTG GCTTAATGGG AATGATTGAT CCCCCAAGAA AGGAAGCCGT TGAAGCAGTG
CGTAAATGCA GACTGGCAGG AATAAAACCT GTTATGATAA CAGGCGACCA CAAGCTGACA
GCTACTGCTA TAGCAAAGGA ATTAAACATA TATTCAATGG GCGATCAGGT ACTCACAGGC
CGGGAACTTG ACGTGATGAA CGAAGCCCAG CTTGAAAAAA TAGCGGATTC CGTATCTGTC
TATGCAAGAG TATCTCCAAA GCATAAGCTT ATGATTGTAA GGGCCTTGAA AAAGACAGGG
CACATAGTTG CTATGACAGG AGATGGAGTT AACGATGCAC CTGCGGTAAA AGAGGCCGAT
ATCGGTGTAT CTATGGGCAT AACGGGAACA GATGTAACCA AGGAAGCTTC CTCAATGATA
CTGCTTGATG ATAATTTCGC TACAATAATT GCGGCAGTGG AAGAGGGACG TGTAATTTAC
AATAATATTA GAAAATTTAT AAGATATATG CTTGCGTGTA ACCTTGGAGA AGTATTAACC
ATGTTCTTGG GAATGTTGCT GTGGCTCCCG ATACCACTCA TGCCAATACA GATTTTGTGG
GTAAACCTTG TTACTGACGG GCTGCCTGCT ATTGCCCTGG GCCTTGATCC GCCTGAAAAT
GATATAATGT TCCGACGTCC AAGAGGTGCA CATGATAGTA TATTCTCCCA TGGTTTGTTG
AAATTGATAA TAGCCAGAGG GATATTTATA GGATTAAGTA CTCTGGGTAT ATTTGTAACC
GTCATGTATT TTGTAAATAA TGTAGAGCTT GCCCGTACGG CGGCGTTTAT GACTCTGGTA
CTTACCCAGT TGGTCCATGT ATTTGAATGT AAATCTGAAA CAAGGAATAT ATTTGAAATC
GATATATTTA ATAATATGCC TTTGGTACTG GCTATTATTT GTTCTCTTGC CATGATACTT
GCTGTTGTAT ATATACCTTC GCTTCAAGGT ATATTTGAAA CGGTTCCTTT GGGATTAAAC
GAGTGGATGC TCATTGCCGG ATTTTCACTT ATGGGGCCTG TGCTGTCAAG TCTTATCGGA
ATAAACAGAA AAAATAAATA TTGCTAA
|
|---|
| Protein sequence | MSVTESMLDF TNPDNLLSKG LTDKEARRKL EKHGPNLLSE RKRISPIKIL FEQFTDLMVI
ILMISTVISG FMGEMTEAIT IIAIIVVNAI MGFVQEYRTE RTMEALKSLA APYAKVIRNE
QQASIPAEDI VPGDVIVLET GDRIAADAAI LECNSLHIDE SLLTGESLPV EKHQLKNKNV
LMDPFDKKSS VYMGTVVTGG RAKAVVYATG MKTEMGSIAD MIQNIEDDET PLQKRLGHLG
KFIAVGCLII CAIVSFTGII RGEKLFNMLL SGISLAVAAV PEGLPAIVTI SLALGVQRML
KRNALIRKLP AVETLGCASV ICSDKTGTLT ENKMTVRKMY ASGYRLDITG NGYNLEGNFL
VDNKPTDPVR VDGIRLALEI GALCNNSVIS HPVPEHTTVG KIKSIFSKQE SFKISGDPTE
IALTIAAAKA GINETYLKRS YKRIDEIPFD SERKCMSIIC KNNCGELLVF TKGAPDVIID
KCSRILSSRG VIKLDELTRR SIIKLNDTMA NDALRVIGVA YRKLETGKYN PGKTNIENEL
IFVGLMGMID PPRKEAVEAV RKCRLAGIKP VMITGDHKLT ATAIAKELNI YSMGDQVLTG
RELDVMNEAQ LEKIADSVSV YARVSPKHKL MIVRALKKTG HIVAMTGDGV NDAPAVKEAD
IGVSMGITGT DVTKEASSMI LLDDNFATII AAVEEGRVIY NNIRKFIRYM LACNLGEVLT
MFLGMLLWLP IPLMPIQILW VNLVTDGLPA IALGLDPPEN DIMFRRPRGA HDSIFSHGLL
KLIIARGIFI GLSTLGIFVT VMYFVNNVEL ARTAAFMTLV LTQLVHVFEC KSETRNIFEI
DIFNNMPLVL AIICSLAMIL AVVYIPSLQG IFETVPLGLN EWMLIAGFSL MGPVLSSLIG
INRKNKYC
|
|---|
| |