Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0181 |
Symbol | |
ID | 7312071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 204453 |
End bp | 205199 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643607110 |
Product | hypothetical protein |
Protein accession | YP_002504549 |
Protein GI | 220927640 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.641158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGGC ATTCAAAATG GGCAAATATA AAACGCCAAA AAGGTGCAGC AGATGCAGTC AGAGGCAAAA TTTTTACTAA GCTGGGAAGA GAAATCCAGA TAGCTGTAAG GATGGGAGGA GCTGACCCAA GTTCAAATTC AAAATTAAAG GATGTTATAG CTAAGTGTAA AGCAAATAAC ATGCCTAATG ACAATATTCA AAGAAGTATT AAAAGGGCTT CCGGTGAAAC TGATGGTTCA AACTACGAAG AAATAACATA TGAAGGCTAC GGCCCGGGCG GAGTTGCGGT TATATGTGAA TGTACAACAG ATAACAGGAA CAGAACAGCC GGTGACCTCA GACATTATTT TGATAAATTT GGCGGAAATC TGGGACAAAG CGGCTGTGTT TCTTACATGT TTAATAAAAA AGGTGTTATA GTCATTGAAA AAAATGATAA GGTTAATGAA GAAACATTAA TGATGGAAGC GTTGGATGCC GGAGCAGAAG ACTTTGATTC AGACGACAAC TGCTACGAAA TAATAACTGA TCCTGCTGAT TTTTCAACTG TTCGTGAGGC ACTTGAGGCA AAGGGCTATG AATTCATTGA AGCAGAGGTT TCAATGATTC CGACCACTAC TACCAAACTT ACAGACCCGG AACAAATAAA GTTCATGGAC AAGCTGATAG AAGCCTTGGA AGACCTTGAT GATGTGTCAA ATGTTTACCA CAGCTGGGAG CAGGATGAGG AAAACGAGGA AGAATAA
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Protein sequence | MSGHSKWANI KRQKGAADAV RGKIFTKLGR EIQIAVRMGG ADPSSNSKLK DVIAKCKANN MPNDNIQRSI KRASGETDGS NYEEITYEGY GPGGVAVICE CTTDNRNRTA GDLRHYFDKF GGNLGQSGCV SYMFNKKGVI VIEKNDKVNE ETLMMEALDA GAEDFDSDDN CYEIITDPAD FSTVREALEA KGYEFIEAEV SMIPTTTTKL TDPEQIKFMD KLIEALEDLD DVSNVYHSWE QDEENEEE
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