Gene Ccel_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0171 
Symbol 
ID7309076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp193822 
End bp194694 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content38% 
IMG OID643607100 
Productdimethyladenosine transferase 
Protein accessionYP_002504539 
Protein GI220927630 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA ACAATACGTC TGAAATAATA AAAAAACATA GATTAAAGCT AACTAAGGCC 
TTGGGGCAGA ACTTTCTGAC TGATTTCAGT GTGGTAAAAA GGATAGTTGA CGCTTCAGAT
ATTGATAAAG ATACTCTTGC AATAGAAATA GGGCCGGGCG TGGGAAGCAT GACACGTGAG
CTGGCAGCAA GGTCTGCCGG AGTAGCAGCT ATAGAAATTG ATAAAAGGCT TATTCCTGCT
TTGAATGACA ATTTGAGCGA TTATTCCAAC GTGAGCATAA TCAACGAAGA TATAATGAAA
GCGGACATTG ATACAATCAT AAATAAGTAC AGGGAAGTAT ATAACGCAAA AAGCGTAAAG
GTTGTTGCAA ACCTGCCATA TTATATTACT ACGCCTATAA TTATGCGTTT TCTGGAGGAA
GTCAAAGGTG TTGACAAGAT GGTATTCATG GTGCAAAGGG AGGTTGCGGA AAGAATGGTT
TCAGGCCCGG GTACCAAGGA CTACGGGGCA CTTTCAGTGG CAGTCCAGTT TTACTCAAAA
CCTGAAATTA TTTTTGACGT TCCTCCCCAC TGTTTTATAC CCCAGCCGGA AGTACATTCA
ACCATAATAG GGCTTGATAT TCTGAGTGAA CCGCCAGTGG AAGTTATTGA CCGCAACCTA
TATTTTAAAA TAGTAAAAGC GTCATTTGGG CAGAGAAGAA AAACTCTTGT AAATGCATTA
TCAAATTCAG GATTTTTTAA TAAAACCAAA GAGCAAATAA AGCAAATACT TAAAGAAATG
GGAAAAAGTG AGAACATTAG AGGTGAAGTT TTAACAGTTG CACAGTTTGC ACAGCTTTCA
AACCTTATGA TAAACGAGCA TCAGAAAGAT TAA
 
Protein sequence
MIKNNTSEII KKHRLKLTKA LGQNFLTDFS VVKRIVDASD IDKDTLAIEI GPGVGSMTRE 
LAARSAGVAA IEIDKRLIPA LNDNLSDYSN VSIINEDIMK ADIDTIINKY REVYNAKSVK
VVANLPYYIT TPIIMRFLEE VKGVDKMVFM VQREVAERMV SGPGTKDYGA LSVAVQFYSK
PEIIFDVPPH CFIPQPEVHS TIIGLDILSE PPVEVIDRNL YFKIVKASFG QRRKTLVNAL
SNSGFFNKTK EQIKQILKEM GKSENIRGEV LTVAQFAQLS NLMINEHQKD