Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0125 |
Symbol | |
ID | 7312062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 139755 |
End bp | 140657 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607054 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002504493 |
Protein GI | 220927584 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACGA CGACGCTTCC AAAAGCATGG GAAGGTGTGC TGGGGTCGGC GAGCTTTATT CCGGTTACCA GTGTCAAAGC AATTGAAAGA TACCACGATG CGGAGTGGTC AAAGGGACTG AGTATACATG AAGCCTTTGA AATGGTTTAT ATTAAATCAG GAAACGGTGT TTTTGAAATA GGGGAGCAAA ACGTTTCGGT AGGCTCTAAT GATATTGTAA TAATAAAACC TAATCAGAGC CATAAGCTTA GTGTTGAGTC CGAGGACGGG TGTGATTTTA TTGTTTTGTA TTTCAAATTT ATTGATCAGA CGGAACATAC TCTTTCAGAG GTATCATTAG GGGATTTTAT AAACTTTGTC AGCGGTAAGG AATCGGGTTC ATTTATTAAG CTCAAAGTGA GCCATAAGAA TGATATAATA ATTCTCTTAA ACAGGATTCT CAAGGAACAG ACAAATGACC AGCTGGGAAG TGATCTGCTC AACTATCTCA TGCTGATGGA GCTGTTTGTA CTTATATCAC GGGCATTGAA GGCTGAATGG GAAAACAGTA TAAAAAACAA AAGCCCAAAA ATAAAAGAAC TGATGCAGTC TGCAATACAA TTCGTACACA ACAATTTTGA ACGGGAGATT TCAATAACGG ATATAGCAAA ATACGTTTTT CTCAGCTCAA GCTATTTCAC AAGAGCTTTC AAAGAAAATA CGGGTCTGAG CCCCATGCAA TATCTGTTAA ACATACGAAT TAAACGGGCA TGTGAACTGC TTCGAGAGAC AGACCAAAAG GTTGGTGAAA TTGCACTTAG CGTAGGCTTT TCCAACCAGC AGAGGTTTAA CGATATATTT AAAAAGCAAA CCAACATGAC TCCTATGCAG TATCGCAATT CGGCAAAAAA CATTCATAAT TAA
|
Protein sequence | METTTLPKAW EGVLGSASFI PVTSVKAIER YHDAEWSKGL SIHEAFEMVY IKSGNGVFEI GEQNVSVGSN DIVIIKPNQS HKLSVESEDG CDFIVLYFKF IDQTEHTLSE VSLGDFINFV SGKESGSFIK LKVSHKNDII ILLNRILKEQ TNDQLGSDLL NYLMLMELFV LISRALKAEW ENSIKNKSPK IKELMQSAIQ FVHNNFEREI SITDIAKYVF LSSSYFTRAF KENTGLSPMQ YLLNIRIKRA CELLRETDQK VGEIALSVGF SNQQRFNDIF KKQTNMTPMQ YRNSAKNIHN
|
| |