| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0124 |
|---|
| Symbol | |
|---|
| ID | 7309037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 138387 |
|---|
| End bp | 139700 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643607053 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002504492 |
|---|
| Protein GI | 220927583 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGT TATTTGAAAG CATGGAGCTG GAAAAGTCCC TTGTGGAGGC ATTAAAAAAG
GAAAGTATAA CAGTACCGAC TGATATACAA CAAAAAGCTA TACCGGAAGC CTTGAAAAAC
AGAGATGTAA TTCTCCATTC TTCTACAGGT ACAGGGAAAA CACTTGCATA CCTTCTTCCC
CTTTTCATGA AACTCTCAGC TGAAAAAAAG GAAATGCAGG CTCTTATACT GGTGCCTACC
CATGAACTGG CGATACAGGT TGTAAGGCAG ATAGAACTGC TTTCTCAAAA TTCTGAAATC
AAAGCCACGT CCACACCAAT TATCGGTGAT GTAAATATTA TGAGGCAGAT AGACAAACTC
AAGCTTAAAC CCCATATAAT AGTAGGAACA CCAGGGAGAA TACTAGAACT GATACAAAAG
AGGAAGATTT CAGCCCATAC CATTAAAACA ATTATTATAG ATGAGGCCGA CCGTCTGCTT
GACGATTACA ACCTAGATAA TATAAAGGCA ATTATCAAAA CAACTCTCAA GGAGAGGCAG
ATAGTAATGT GCTCGGCAAC TATTTCTAAA AAGACAGTAG AGCGTGCTAT GCCGTTGATG
AAAGAGCCTC TTGTGATAGA GAGCAAAGCT GATATGGGTG TTCCCGATGC TATTGAGCAT
CTGTATTTTG TTTCGGAACA AAGAGATAAA ATAGATGTTT TGAGAAAGCT TGTACGAATG
ATAAATCCTA AAAAAGCGAT TGCATTTTTT GCTAACAGTG AAGATATTCT TGTTTCGGAA
GAGAAGCTCA GATATCATAA GCTGAAGGCC GGAGGTATTC ATGGTTCAAA TATAAAATCC
GACAGGAAGA AAACCATGGA TGATTTCAAA AATGGAAGGC TGCAGCTTTT GATAGCCTCT
GATATTGCAG CAAGGGGCCT TGATATAGAA GATGTAACAC ATATTTTTAA TGTTAATATC
CCTGAAAGAT CAATGGACTA TCTGCATAGG GCAGGCCGGA CAGGAAGAAA TGGGAAACCG
GGAGTGGCAA TATCCATTGT GACCGAAAAG GAAATAGAGT TTATAAGAAA ATTTGAAAAG
GAACTTAAAA TAAAAATAAT TCCAAAATCC ATGTTTAATG GAAAAATTGT TGAATATAAA
AAGGAAAGAA GTATGAGGAC TACGGGTAGG CCTAAATCAG GAAGTCCAGC AGGTACCGAA
AAAAGTAAAA TCAGCAGTGC TAAGCGAAGC CAGCCAGTTG ACAGGAAGAA GGCCTTTGGA
GATAAGAAGA AGTGGGGCAA AGGGCCTAAA GTGTACCATG GGCCCAAAAA GTAG
|
|---|
| Protein sequence | MEQLFESMEL EKSLVEALKK ESITVPTDIQ QKAIPEALKN RDVILHSSTG TGKTLAYLLP
LFMKLSAEKK EMQALILVPT HELAIQVVRQ IELLSQNSEI KATSTPIIGD VNIMRQIDKL
KLKPHIIVGT PGRILELIQK RKISAHTIKT IIIDEADRLL DDYNLDNIKA IIKTTLKERQ
IVMCSATISK KTVERAMPLM KEPLVIESKA DMGVPDAIEH LYFVSEQRDK IDVLRKLVRM
INPKKAIAFF ANSEDILVSE EKLRYHKLKA GGIHGSNIKS DRKKTMDDFK NGRLQLLIAS
DIAARGLDIE DVTHIFNVNI PERSMDYLHR AGRTGRNGKP GVAISIVTEK EIEFIRKFEK
ELKIKIIPKS MFNGKIVEYK KERSMRTTGR PKSGSPAGTE KSKISSAKRS QPVDRKKAFG
DKKKWGKGPK VYHGPKK
|
|---|
| |