Gene Ccel_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0090 
Symbol 
ID7309005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand+ 
Start bp106584 
End bp107246 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID643607019 
Productphosphoribosyltransferase 
Protein accessionYP_002504458 
Protein GI220927549 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGAAT ATTTCTTTCC CCCGAGGTGT GCACTATGCA ACGCTATTTT AAAGGCTGGA 
GTGGCGATTT ATATTTGTGA AAAATGTGCC GGGGAGATAG GCTATTATAA AAATTCAGTG 
ACTCCCTTAA ACCTTCCCGT AGGAATACAA AATTATTGTG ACGGGATACT CTGTGTCGGC 
AGATATTCAG ATTCTCTCAA GGAAGCGTTG AGAAGGTTTA AATTCAGCAA TAAGCCATCG 
TACTACCGTA CATTTGGGAG GCTGTTGGCT TTAAAAGTAG AAAACACAGA ACAAAAAGTA 
CGTTTTGACA TTATTGTTCC AGTTCCTTTA TATAAAAGCA AAGAAAAGAC GAGAGGTTAC 
AATCAGGCTG AACTGATGGC AGGGCAGGTT TCTAAAATAC TAAATGTACC TTGTGAAAAA 
AGGCTTTTAA ACAAGACATT CGAAACTAAA AGCCAGAGTA TACTGAAAAA AAACGAACGG 
TTATTAAATC TTCAAGATGC ATTTGTGGCC ATTAATCAAA GAATGATAGT AAACAAAAAC 
ATATTACTTA TTGATGATAT CTTAACTACA GGGAGTACTG TCAATCAATG CTGTAAGGCA 
CTAAAAGAAG CGGGTGCCGG GAAGGTTATA GCGGGAGTTG TTGCAACTAC CAGAAACTAT 
TGA
 
Protein sequence
MIEYFFPPRC ALCNAILKAG VAIYICEKCA GEIGYYKNSV TPLNLPVGIQ NYCDGILCVG 
RYSDSLKEAL RRFKFSNKPS YYRTFGRLLA LKVENTEQKV RFDIIVPVPL YKSKEKTRGY 
NQAELMAGQV SKILNVPCEK RLLNKTFETK SQSILKKNER LLNLQDAFVA INQRMIVNKN 
ILLIDDILTT GSTVNQCCKA LKEAGAGKVI AGVVATTRNY