Gene Ccel_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0089 
Symbol 
ID7309004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp103985 
End bp106426 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content39% 
IMG OID643607018 
Productexonuclease V subunit alpha 
Protein accessionYP_002504457 
Protein GI220927548 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.930068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CACAATTTCA ACAACAAAGA TGGTCTTTCG AAAGCTACCC GGTAGGCACA 
AATCTAAATA TAATCGGAAG ATTTGATTTT AAAATATATG AAAATTCGGA AAACGGATAT
AAAATTTATA CCTTTGATAT AGAGAAAATT ATAGATGATG ATGGCTTTGA GCATGAAGTT
GCTGACCAGA TTAGCGTAAC CGGTTATTAT GAGGTTAATG AGCACTGTGC TGTACTGCCA
AGCAAGATAA GGGGTTCAGT GGCTGCCTAC AAAGGAGAAA AACAGCTTAA GGCTGAAACA
GTTGAATTTA TTGAACCTGC TACGGATGAA GGTATTATTT CTTTCTTGTC CTGCGGAATT
ATAAAGGGTG TTGGAGAAAA GACGGCAAGA AATATTGTGT CAGGCTATAA ATCAGGTTCA
AATTATGTTG AAGGCTTTGG AAGCAATACT TTGGAAGTGA TAAAAAACGA ACCTTTGCTG
CTTACTAAAA TAAGAGGAAT TTCACCGGAT AAAGCCAGAG TAATTCACGA CTCCTATATG
GAAAACATGG AATATCAGAA TGTTATGATT TTCTTTCAGA GGTTCGGAGT TTCCTCTGCC
AAAGCTATGA AAATTTACAA TAACTTTAAA GGCACTTCCA TTGCCATAGC CGAACAGAAT
CCCTACATGT TTGCTGATAT AAGAGGGTTT GGTTTTAAAA GCTGTGATGA AATTGCCAGA
AAGCTTGGGA TAGACCCACA CTCAGTATTC AGACTTGAAG CAGCTCTTAA AAGTGTTCTT
CAAACAGCAG AGGCTGACGG AAATTGTTAT TTGCTCAAAG CTAAACTTCT TGAAATGACT
GCAAAGGCTT TAAGTAATCC GGATGTTACG GTAACTACTG ATGAACTGGA AGATGCCTAT
AATAGAATGC TTAAATCGGG CAGTCTGGTT AATATAACTT TTTCGGAAGA CCAGCAAAGC
TTTGAGGCAG TGTACACGAA GGAAATGTAT AAAATTGAGT ATGAAACTGC TTTGGCAATT
AAGGAGATAG CCCGCTGCCA GCCTGATGTG CCTATGTTTA GCGTAGACAA ACTTATTGAA
GAATTTGAAG CTATGAGGGG CTTTAATCTT GAAAGTATGC AGAAGGAAGC AGTAAAAGCG
GTTTTTAATA CAAATATGCT TATTCTTACC GGGTCAGCCG GGAGCGGCAA AACCACTACT
GTTGAATGTA TGATCTATGT TTTACAGAGA TATTTTGAAA AACAAGAAGA GATGAGTTTC
ATGTTGGCTG CACCGACTGG GAAAGCGGCC AAAAGACTCA CGGAAATCAC TGGTTTTGAA
GCTATGACTC TGCACAGGCT TCTGCAATTC TCATACGAGA ACAAGGGCTT TTTTTACAGG
CAGGGAAATG AGCTGCCATA TGATTTAATT GTAGTGGATG AAAGCTCCAT GCTAAGCATA
GACCTAGCTC ATGCACTGTT TACGGCTATT TCGCCTGGCA CAACAGTAGT ACTTATTGGG
GATACCCAGC AGATTCCGTC TGTTGGTGCA GGCAATGTAC TTGATGACAT GATTAAGAGC
GGAGTTATAC CTACCGTCAA GCTCAATGTA ATAAAGCGTC AGGAAGACGG CTCAGGTATA
ATTTTCAATG CAAATAGGAT TATTAATGGT GAAATGCCTG AAATAATTAA CGCCAACAAG
GATTTTTTCA TAGTTGAAGA GGATGATAAA AACAGAGTTA TAAAGAGGAC TCTTGAGGCG
TTGAACAGAT TGATGACAGG CTACAACTAC ACTATTGACG ATGTTCAAGT TATTTGCCCT
CAAAAAACTT CGGAATTAGG CACCTATGAA ATGAATAAGG CCATTCAGGA GATGGTAAAT
CCAGCTGCTG CCGGAAAGGC TGAAGTTAAA AGAGGTAACA GTGTATTCCG TCAAGGTGAC
AAAGTAATCC ATTTAAACAA TAACTATGAA GCTACCCACT ACCACAAAGA TGCTAAAACA
GGGAGGTATA TCGCGGATGA AGGCAGTGGT GTATTTAACG GAGATATAGG AAGAATAATT
GAAATTTCTA AAATAGGAGA AATTGATCAG GAGTCGGAAG ACGGGGAAGC TGCCGGTGAC
AATAATACTG AGGAGAAGGT GGCTGTTCAA TACGATGAAT TTATTATTAT ATATCAGATA
AATGAGCTAG AGGAGATAGA TCTGGCATAC AGCCTTACCG TGCATAAGAT GCAAGGCTCG
CAATGTGAAG CGGCAATATT TTTATGTCAC CTACGAAATT ATATAATGCT AAATCGGAAT
TTAGGCTATA CGGCTGTGAC AAGGGCAAAG AGAATGGCAT GCATAATAGG CCAAAGGAAA
GCTATATCTG TTATGGTTCA AAATGTGAAA GTTACACAAA GGAATACAAT GTTAGCTGAT
TTACTATCTT TGAAGATGAT CGATCCAAAT ACGACTTCCT AG
 
Protein sequence
MAISQFQQQR WSFESYPVGT NLNIIGRFDF KIYENSENGY KIYTFDIEKI IDDDGFEHEV 
ADQISVTGYY EVNEHCAVLP SKIRGSVAAY KGEKQLKAET VEFIEPATDE GIISFLSCGI
IKGVGEKTAR NIVSGYKSGS NYVEGFGSNT LEVIKNEPLL LTKIRGISPD KARVIHDSYM
ENMEYQNVMI FFQRFGVSSA KAMKIYNNFK GTSIAIAEQN PYMFADIRGF GFKSCDEIAR
KLGIDPHSVF RLEAALKSVL QTAEADGNCY LLKAKLLEMT AKALSNPDVT VTTDELEDAY
NRMLKSGSLV NITFSEDQQS FEAVYTKEMY KIEYETALAI KEIARCQPDV PMFSVDKLIE
EFEAMRGFNL ESMQKEAVKA VFNTNMLILT GSAGSGKTTT VECMIYVLQR YFEKQEEMSF
MLAAPTGKAA KRLTEITGFE AMTLHRLLQF SYENKGFFYR QGNELPYDLI VVDESSMLSI
DLAHALFTAI SPGTTVVLIG DTQQIPSVGA GNVLDDMIKS GVIPTVKLNV IKRQEDGSGI
IFNANRIING EMPEIINANK DFFIVEEDDK NRVIKRTLEA LNRLMTGYNY TIDDVQVICP
QKTSELGTYE MNKAIQEMVN PAAAGKAEVK RGNSVFRQGD KVIHLNNNYE ATHYHKDAKT
GRYIADEGSG VFNGDIGRII EISKIGEIDQ ESEDGEAAGD NNTEEKVAVQ YDEFIIIYQI
NELEEIDLAY SLTVHKMQGS QCEAAIFLCH LRNYIMLNRN LGYTAVTRAK RMACIIGQRK
AISVMVQNVK VTQRNTMLAD LLSLKMIDPN TTS