Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0089 |
Symbol | |
ID | 7309004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 103985 |
End bp | 106426 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607018 |
Product | exonuclease V subunit alpha |
Protein accession | YP_002504457 |
Protein GI | 220927548 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.930068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTT CACAATTTCA ACAACAAAGA TGGTCTTTCG AAAGCTACCC GGTAGGCACA AATCTAAATA TAATCGGAAG ATTTGATTTT AAAATATATG AAAATTCGGA AAACGGATAT AAAATTTATA CCTTTGATAT AGAGAAAATT ATAGATGATG ATGGCTTTGA GCATGAAGTT GCTGACCAGA TTAGCGTAAC CGGTTATTAT GAGGTTAATG AGCACTGTGC TGTACTGCCA AGCAAGATAA GGGGTTCAGT GGCTGCCTAC AAAGGAGAAA AACAGCTTAA GGCTGAAACA GTTGAATTTA TTGAACCTGC TACGGATGAA GGTATTATTT CTTTCTTGTC CTGCGGAATT ATAAAGGGTG TTGGAGAAAA GACGGCAAGA AATATTGTGT CAGGCTATAA ATCAGGTTCA AATTATGTTG AAGGCTTTGG AAGCAATACT TTGGAAGTGA TAAAAAACGA ACCTTTGCTG CTTACTAAAA TAAGAGGAAT TTCACCGGAT AAAGCCAGAG TAATTCACGA CTCCTATATG GAAAACATGG AATATCAGAA TGTTATGATT TTCTTTCAGA GGTTCGGAGT TTCCTCTGCC AAAGCTATGA AAATTTACAA TAACTTTAAA GGCACTTCCA TTGCCATAGC CGAACAGAAT CCCTACATGT TTGCTGATAT AAGAGGGTTT GGTTTTAAAA GCTGTGATGA AATTGCCAGA AAGCTTGGGA TAGACCCACA CTCAGTATTC AGACTTGAAG CAGCTCTTAA AAGTGTTCTT CAAACAGCAG AGGCTGACGG AAATTGTTAT TTGCTCAAAG CTAAACTTCT TGAAATGACT GCAAAGGCTT TAAGTAATCC GGATGTTACG GTAACTACTG ATGAACTGGA AGATGCCTAT AATAGAATGC TTAAATCGGG CAGTCTGGTT AATATAACTT TTTCGGAAGA CCAGCAAAGC TTTGAGGCAG TGTACACGAA GGAAATGTAT AAAATTGAGT ATGAAACTGC TTTGGCAATT AAGGAGATAG CCCGCTGCCA GCCTGATGTG CCTATGTTTA GCGTAGACAA ACTTATTGAA GAATTTGAAG CTATGAGGGG CTTTAATCTT GAAAGTATGC AGAAGGAAGC AGTAAAAGCG GTTTTTAATA CAAATATGCT TATTCTTACC GGGTCAGCCG GGAGCGGCAA AACCACTACT GTTGAATGTA TGATCTATGT TTTACAGAGA TATTTTGAAA AACAAGAAGA GATGAGTTTC ATGTTGGCTG CACCGACTGG GAAAGCGGCC AAAAGACTCA CGGAAATCAC TGGTTTTGAA GCTATGACTC TGCACAGGCT TCTGCAATTC TCATACGAGA ACAAGGGCTT TTTTTACAGG CAGGGAAATG AGCTGCCATA TGATTTAATT GTAGTGGATG AAAGCTCCAT GCTAAGCATA GACCTAGCTC ATGCACTGTT TACGGCTATT TCGCCTGGCA CAACAGTAGT ACTTATTGGG GATACCCAGC AGATTCCGTC TGTTGGTGCA GGCAATGTAC TTGATGACAT GATTAAGAGC GGAGTTATAC CTACCGTCAA GCTCAATGTA ATAAAGCGTC AGGAAGACGG CTCAGGTATA ATTTTCAATG CAAATAGGAT TATTAATGGT GAAATGCCTG AAATAATTAA CGCCAACAAG GATTTTTTCA TAGTTGAAGA GGATGATAAA AACAGAGTTA TAAAGAGGAC TCTTGAGGCG TTGAACAGAT TGATGACAGG CTACAACTAC ACTATTGACG ATGTTCAAGT TATTTGCCCT CAAAAAACTT CGGAATTAGG CACCTATGAA ATGAATAAGG CCATTCAGGA GATGGTAAAT CCAGCTGCTG CCGGAAAGGC TGAAGTTAAA AGAGGTAACA GTGTATTCCG TCAAGGTGAC AAAGTAATCC ATTTAAACAA TAACTATGAA GCTACCCACT ACCACAAAGA TGCTAAAACA GGGAGGTATA TCGCGGATGA AGGCAGTGGT GTATTTAACG GAGATATAGG AAGAATAATT GAAATTTCTA AAATAGGAGA AATTGATCAG GAGTCGGAAG ACGGGGAAGC TGCCGGTGAC AATAATACTG AGGAGAAGGT GGCTGTTCAA TACGATGAAT TTATTATTAT ATATCAGATA AATGAGCTAG AGGAGATAGA TCTGGCATAC AGCCTTACCG TGCATAAGAT GCAAGGCTCG CAATGTGAAG CGGCAATATT TTTATGTCAC CTACGAAATT ATATAATGCT AAATCGGAAT TTAGGCTATA CGGCTGTGAC AAGGGCAAAG AGAATGGCAT GCATAATAGG CCAAAGGAAA GCTATATCTG TTATGGTTCA AAATGTGAAA GTTACACAAA GGAATACAAT GTTAGCTGAT TTACTATCTT TGAAGATGAT CGATCCAAAT ACGACTTCCT AG
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Protein sequence | MAISQFQQQR WSFESYPVGT NLNIIGRFDF KIYENSENGY KIYTFDIEKI IDDDGFEHEV ADQISVTGYY EVNEHCAVLP SKIRGSVAAY KGEKQLKAET VEFIEPATDE GIISFLSCGI IKGVGEKTAR NIVSGYKSGS NYVEGFGSNT LEVIKNEPLL LTKIRGISPD KARVIHDSYM ENMEYQNVMI FFQRFGVSSA KAMKIYNNFK GTSIAIAEQN PYMFADIRGF GFKSCDEIAR KLGIDPHSVF RLEAALKSVL QTAEADGNCY LLKAKLLEMT AKALSNPDVT VTTDELEDAY NRMLKSGSLV NITFSEDQQS FEAVYTKEMY KIEYETALAI KEIARCQPDV PMFSVDKLIE EFEAMRGFNL ESMQKEAVKA VFNTNMLILT GSAGSGKTTT VECMIYVLQR YFEKQEEMSF MLAAPTGKAA KRLTEITGFE AMTLHRLLQF SYENKGFFYR QGNELPYDLI VVDESSMLSI DLAHALFTAI SPGTTVVLIG DTQQIPSVGA GNVLDDMIKS GVIPTVKLNV IKRQEDGSGI IFNANRIING EMPEIINANK DFFIVEEDDK NRVIKRTLEA LNRLMTGYNY TIDDVQVICP QKTSELGTYE MNKAIQEMVN PAAAGKAEVK RGNSVFRQGD KVIHLNNNYE ATHYHKDAKT GRYIADEGSG VFNGDIGRII EISKIGEIDQ ESEDGEAAGD NNTEEKVAVQ YDEFIIIYQI NELEEIDLAY SLTVHKMQGS QCEAAIFLCH LRNYIMLNRN LGYTAVTRAK RMACIIGQRK AISVMVQNVK VTQRNTMLAD LLSLKMIDPN TTS
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