Gene Ccel_0085 details

Gene Information

• Locus tag: Ccel_0085
• ID: 7309000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 99447
• End bp: 101306
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643607014
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002504453
• Protein GI: 220927544
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0128077
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATATT TTAAGGGTAT CAGTTTTTAT ATAATTATTT TTATACTTAT TTTGGTAATA 
ATAACCTTCT TTACCGCTAC TGATAATCCA CCTAAAATGA GTTATTCTGA ATTATTAACT 
GAAATGAAGG CAGGAAATGT AAAGAGTATA GGGTTACAAA CAGATACAGC TACAATAGAA 
TTGAAGAAGC CTAAAGAAAA TAATAGGACC AAATTTGTAG TTATTGTCCC TCCGGATGTT 
ACATCTGCAT CTGAGAGATT TACAGCTGCA TTGGATAATA AGCTTATAGA AGATTTTCAT 
GTAACTCAGC CGCCGCAGCC CCCATGGTGG GTGTCAATGC TGCCTACGGT AGGCCTTGTA 
ATAATACTTA TTCTTATATG GTTCTTTTTT ATTCAGCAGT CCCAAGGTGG AGGCGGAGGC 
AATAGGGTTA TGTCCTTTGG GAAAAGCCGT GCTAAAATGA CTGTTGACGA CAAGAAGAAG 
ATTACGTTTG AGAATGTAGC AGGAGCAGAT GAAGAGAAAG AGGAACTGGC AGAAATAGTT 
GAGTTCCTAA AAGCACCTAA GAAATTTGTT GAACTGGGTG CTAGAATACC AAAGGGTGTT 
CTCCTTGTTG GACCTCCGGG AACAGGTAAA ACACTTTTGG CGAAGGCTGT TTCAGGTGAA 
GCGGGAGTAC CGTTTTTCAG CATAAGCGGT TCGGACTTCG TTGAAATGTT CGTAGGTGTT 
GGTGCTTCCC GTGTACGTGA TCTTTTTGAA CAGGCAAAAA AGAACGCACC ATGTATTGTA 
TTTATAGATG AAATAGATGC CGTTGGTCGT CATAGAGGAG CAGGTCTTGG TGGAGGACAT 
GATGAAAGAG AACAGACCCT CAATCAGCTT CTTGTTGAAA TGGATGGCTT CGGTATAAAT 
GAGGGAGTAA TCATACTGGC TGCAACAAAT AGACCTGACA TTCTGGATCC TGCGTTGCTT 
AGACCGGGAC GTTTTGACAG ACGGGTAGTT GTTGGTCTCC CTGATATCAA AGGAAGAGAG 
CAGATATTAA AGGTTCACTC AAGAGGAAAG CCATTGGCAG ATGATGTAAG GTTAGATGAT 
CTTGCTAGAA TAACGCCGGG CTTTACTGGG GCAGATATTG AAAATCTTTT AAACGAAGCT 
GCTTTGCTTA CTGCCAGAGC CAATAAGAAA AAAATAGGTA ATGAAGAGAT AAAAGAAGCT 
GCCTTTAAAG TAATGATGGG ACCTGAAAAG AAGAGCCGTG TTATGAGTGA ACATGACAAA 
AAGGTTACGG CTTATCACGA AGCGGGCCAT GCTATTGCAA TAAAGCTTGT ATCATCTAGC 
CAGAAGGTAG ACAGAGTGTC AATCATACCT GCAGGTATGG CAGGCGGATA TACTGCAAGC 
AGACCTCAGG AGGACAAGAG CTATCACACC AGGTCTCAAC TGATTGAAGA AATAATTATT 
GCACTTGGGG GAAGAGCAGC CGAGGAAATC ACCATGGATG AAGTCAGTAC AGGAGCATCA 
AGTGACCTTA AAAAGGTTAA CCAGATTGCA AGAAATATGG TTACCAAATA CGGTATGAGT 
GAGAAACTTG GTAATATGAT TTTCGGAAAT GATAATGATG AAGTTTTCAT TGGAAGGGAT 
CTTGCTCAGG CAAGAAATTA CAGTGATGAG TTAGCGGCAA TCATTGATAA TGAGGTTAAG 
AGCATCATTG ACAATGCATA CCAAAAAACT GTATCACTTT TAAGAGAAAA TATCGTAAGA 
CTTAATAAAC TTGCAGAAGT GCTTCTTGAA AAAGAAAAGG TTGAAGGTGC TGAGTTCGAA 
GAAATTTTCG AAAACGCGGT ACTGGAGGGT TCTTCACAAA CACCTCAGTT GGAAGGTTAA 

 

Protein sequence

MKYFKGISFY IIIFILILVI ITFFTATDNP PKMSYSELLT EMKAGNVKSI GLQTDTATIE 
LKKPKENNRT KFVVIVPPDV TSASERFTAA LDNKLIEDFH VTQPPQPPWW VSMLPTVGLV 
IILILIWFFF IQQSQGGGGG NRVMSFGKSR AKMTVDDKKK ITFENVAGAD EEKEELAEIV 
EFLKAPKKFV ELGARIPKGV LLVGPPGTGK TLLAKAVSGE AGVPFFSISG SDFVEMFVGV 
GASRVRDLFE QAKKNAPCIV FIDEIDAVGR HRGAGLGGGH DEREQTLNQL LVEMDGFGIN 
EGVIILAATN RPDILDPALL RPGRFDRRVV VGLPDIKGRE QILKVHSRGK PLADDVRLDD 
LARITPGFTG ADIENLLNEA ALLTARANKK KIGNEEIKEA AFKVMMGPEK KSRVMSEHDK 
KVTAYHEAGH AIAIKLVSSS QKVDRVSIIP AGMAGGYTAS RPQEDKSYHT RSQLIEEIII 
ALGGRAAEEI TMDEVSTGAS SDLKKVNQIA RNMVTKYGMS EKLGNMIFGN DNDEVFIGRD 
LAQARNYSDE LAAIIDNEVK SIIDNAYQKT VSLLRENIVR LNKLAEVLLE KEKVEGAEFE 
EIFENAVLEG SSQTPQLEG