Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0068 |
Symbol | |
ID | 7308984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 78824 |
End bp | 80209 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643606997 |
Product | integrase family protein |
Protein accession | YP_002504436 |
Protein GI | 220927527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTTA ACTACGATGA TGACATTTGG AGAATTCCTG CAACAAACAA TTACTCAATA ACAGATTATA ACTTTGAATT TGGTAGGTTT AAGTCACCGA CTTTGAAGAT GCAGGTTAAA GACTATATGT ATGCCCATCT GAAAAGAGAC GTGGTAGAGC ATTCTACTTT ACATAGGTAT TGCTATTCTC TACAGCATTT TGCTAATTTT ATTGAGAGCA ATGAAATATG GTTGAGTTAC TTTAGCGAAT TAACACCGTT AATGATTGAC CAATTTATTT TATATTTAAA GCGAGAATTA AAATCACCAA AGACAATGGT GGTTGCATTC TCAGCATTGA AGTCAGTTGT CAGGTTTGGA CAGTTTTTGC AGAGTGAAAA ATACCCACCG ATGCAAATAT TTCCGGATAG CCCATGTAGG ATATTTGGTA TTGAAGACAC TTTGACTACT AAATGCATAA GTAATTTTGT TATGATTCAA ATTAATCAGG CACTGAAAAA GGAACAAGAC ATTCTGCTTA AGACTTGCCT GCTAATAGCG AAAGAGACGG GGTTACGATT GTCAGAAATA TTGTTGCTTG AAGAAGGGTG TGTAATGGAA GACTTTTTAG GAAGTCCAAT CCTATTTACT TTTTCCCCCA AAATTGACGA TGAAAGAGCA GTCGTAATCT CAACAGAACT TCTAAAGGTA GTAAATGAAC TTAACAGATA TACGAAAGAG TTTCGCAAAA AAAATAATAC ATTACTATTA TTTGTGCGGA AAGCTAAAAA GAAATGTCGT AAAGAAATTG TTCAATATAA CCAATCTATT GCTCGTAGTG AATTAAGGGA TTTTAAGATT CGAAACAAGA TTGTTGACGA AAGTGGGCAA ATAGCTGACT TTACGTTTCA TAGCTTTCGA CACACATTGG GAACTGATAT GATAAACAAT GGTATGTCGC CGATAGATGT TAGAAGTCAA TTAGGACATG TATCTATGCA CTCAACGGGC ATTTATGCAA GGGTCTCAAA TACATCTTTA CAGAATGAAT ATGCAAAGTT GGGGTTTATT GGGATAAGTG AAAAAACACT TAGTGATGTC TATAGTATCT CAGAAAAGGT TATTGCTGAG GAAAAAAAGA TACAAGGAGC ATTACCGGAT GGGATTTGTA CTAAAGTCTT CGAAGGAGAG ACTCATTGCA GTAAGTTCAA TATGTGCCTG TTTTGCGATA AGTATAGGAC GTTTATTAAG GATCTTCCGA CGCACAAGGA GCATCTCGAA CGATTAAGGA AGGACAGAAT ACAATACATG AGTGAAATGA GCATAGGTAA TCAGGAGTTT TTACAACGAA TAGAAGATGC TTTAGTTACA ATAATCGAAA GATTGGAGAC GTTAGCATGT ACTTAG
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Protein sequence | MIVNYDDDIW RIPATNNYSI TDYNFEFGRF KSPTLKMQVK DYMYAHLKRD VVEHSTLHRY CYSLQHFANF IESNEIWLSY FSELTPLMID QFILYLKREL KSPKTMVVAF SALKSVVRFG QFLQSEKYPP MQIFPDSPCR IFGIEDTLTT KCISNFVMIQ INQALKKEQD ILLKTCLLIA KETGLRLSEI LLLEEGCVME DFLGSPILFT FSPKIDDERA VVISTELLKV VNELNRYTKE FRKKNNTLLL FVRKAKKKCR KEIVQYNQSI ARSELRDFKI RNKIVDESGQ IADFTFHSFR HTLGTDMINN GMSPIDVRSQ LGHVSMHSTG IYARVSNTSL QNEYAKLGFI GISEKTLSDV YSISEKVIAE EKKIQGALPD GICTKVFEGE THCSKFNMCL FCDKYRTFIK DLPTHKEHLE RLRKDRIQYM SEMSIGNQEF LQRIEDALVT IIERLETLAC T
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