| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0050 |
|---|
| Symbol | |
|---|
| ID | 7308969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 55000 |
|---|
| End bp | 55911 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643606979 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_002504418 |
|---|
| Protein GI | 220927509 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG TCTTTATTAT AAACCCGGCG GCAGGAAAAG GAAGAGCTTT AAAACTTATA
CCGATAATCC AAGAATATTT TAAGGGAAAA TCTGATGAGT ATTTGATAAA GGTAACGGAG
TATCCCGGAC ATGCAACAAA AATTGCCCGG GAATATGCAC AGGGTGAGGT ATGTAGGATA
TATTCGCTGG GAGGAGACGG GACTGTTAAT GAGGTAGTAA ACGGAATAGC CGGGACTAAT
GCTTCTCTTG GAGTTATACC GGCCGGGTCC GGTAACGATT TTATAAGAAG CATCTGTGGG
GAGTATAATG TCAGGGAAGT TGTCGCCGAT ACCATCGGTG GAGAGGAAAG AAGAATTGAC
CTGGCAATGG CAAACGGAAA ATATTTCATA AATATATCTT CTATAGGGTT TGATGCAGAC
GTAGTTTATA ATGCACAGAA ATTTAAAAGG CTACCCTGTG TAACTGGGAG TATGGCGTAT
CTGTTTTCAT TGATATACAC AATTTTTAAA AACAAAATAA ATGAGGTAAT AGTTACGATA
GACGACAAGA AAATCAATCT TAAAATACTT TTGGCTGCAG TTGCCAATGG AAGATTCTAT
GGCGGAGGGA TGTTGCCTGC ACCGGATGCT GTTCTTGATG ATGGTTTGTT GGATATATGT
CTGGTGCAGG AAGTCAACAG ACTAAAAATG TTAACCTTGT TTCCAAAGTA TATGAAGGGC
GAGCATGGAC AAATAAAATA CGTGAGTTTT CTAAGGGGCA GGAAAATAAA AATCGAGAGT
AAAAAAACTA TTTCACTGAA TATAGACGGA GAAATTCTTA CAGGAAAGGA TATTGAGTTT
GAAATACTAA AAGGTGCTAT TAATGTCATT TATCCCGTTG GGACAATAAA GGAATGTGTA
GCTAATTTTT AA
|
|---|
| Protein sequence | MKHVFIINPA AGKGRALKLI PIIQEYFKGK SDEYLIKVTE YPGHATKIAR EYAQGEVCRI
YSLGGDGTVN EVVNGIAGTN ASLGVIPAGS GNDFIRSICG EYNVREVVAD TIGGEERRID
LAMANGKYFI NISSIGFDAD VVYNAQKFKR LPCVTGSMAY LFSLIYTIFK NKINEVIVTI
DDKKINLKIL LAAVANGRFY GGGMLPAPDA VLDDGLLDIC LVQEVNRLKM LTLFPKYMKG
EHGQIKYVSF LRGRKIKIES KKTISLNIDG EILTGKDIEF EILKGAINVI YPVGTIKECV
ANF
|
|---|
| |