Gene Ccel_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0046 
Symbol 
ID7308964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand- 
Start bp49039 
End bp50049 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID643606974 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002504414 
Protein GI220927505 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA AACTACTTGA AATAAACGAT TTAAAGGTCT CATTTTTTAC CCCGGCAGGT 
GAAGTTAAAG CTGTAAACGG GATAAGCTAT TCACTTGAAC CCGGTAAAGT TCTGGGTATC 
GTAGGAGAGT CAGGTTCAGG AAAAAGTGTT TCATCTTATT CTGTTATTGG ACTAATCGAT 
AAGCCCGGAA AGATTGTAGG CGGAAGCATT ACTTTTAACG GTAAAGATGT TTCCAAAATG 
TCAAAACAGG AACGTCTTGC CATGGCAGGG AATGAAATAG CAATGATATT TCAGGACCCA 
ATGACTTGTC TTAACCCTGT TTTTACTATA GGCAACCAGA TTGCGGAATC CCTATACCAC 
AAGTATGGGA AAATATCCAA GGATGATGTC AAGAAAAGAT CAATGGATCT TTTATCACTT 
GTAGGTATAA ATGAGCCTGA AAAAAGGCTT TCTCAATATC CACATGAATT CTCAGGAGGT 
ATGAGGCAAA GGGCTATGAT TGCCATGGCA CTTGCAGGTG AGCCAAAGCT GCTGATTGCT 
GATGAACCGA CAACAGCACT TGATGTTACC ATACAAGCAC AGATTCTTGA ACTACTAAAA 
GATATACAGA AAAAAACCGG TATGGCCATT GTTCTGATTA CTCATGATTT GGGAATAGTA 
GCAGATATGG CTGATGATAT TATTGTTATG TACGGTGGGA AAATAGTTGA ACAGGGGTCA 
GTATACAGCA TATTTAAAAA CCCACACCAT CCTTATACCA AAGGACTTCT ACGTTCATTG 
CCCGACTTGA ACGCCAAGGG TTCGAAGCTA ATTCCTATTA TGGGAAACCC AATTGATTTG 
CTTCATCTCC CCTCCGGATG TGCCTTTGCC CCAAGATGTG AGGAATGCCT GAAAGTCTGT 
ATTAGCAACA TGCCTGAAGC CTATAAAGAT GCTGATGGCC ATACTACTTC TTGCTGGTTG 
ATGGATGAGA GGGCAAAAGA AAGTGTGGAG GAACATAAAA ATGGAAAATA A
 
Protein sequence
MNNKLLEIND LKVSFFTPAG EVKAVNGISY SLEPGKVLGI VGESGSGKSV SSYSVIGLID 
KPGKIVGGSI TFNGKDVSKM SKQERLAMAG NEIAMIFQDP MTCLNPVFTI GNQIAESLYH 
KYGKISKDDV KKRSMDLLSL VGINEPEKRL SQYPHEFSGG MRQRAMIAMA LAGEPKLLIA 
DEPTTALDVT IQAQILELLK DIQKKTGMAI VLITHDLGIV ADMADDIIVM YGGKIVEQGS 
VYSIFKNPHH PYTKGLLRSL PDLNAKGSKL IPIMGNPIDL LHLPSGCAFA PRCEECLKVC 
ISNMPEAYKD ADGHTTSCWL MDERAKESVE EHKNGK