Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0033 |
Symbol | |
ID | 7312053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 35660 |
End bp | 36586 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643606961 |
Product | NLP/P60 protein |
Protein accession | YP_002504401 |
Protein GI | 220927492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAC ATTTAATTAT ATATATTTTT GCTGTTACAA CAGCTATTAT CTTAACATTG GCAGGATGTG GTAATAGGGA CATTCCTGTC ACAAAAAATG AACAATACGT AAGCGGTATT ACTTGGGATA ATGCTGCGAT TATAAATGAC GCCGTTGTTG ATGTATTCAG CCGTAATGAC ATTCTGAGTA CAAGGATAAC ACAGGCTCTT TTTAACCAGA TTGTAAAGAT TGTTTCTCAA GAAGGCTCAT GGACCAGGAT TATGTTGCTG GATGGAACTA CGGGGTGGGT TAAGACCAAA TACATTAGTA GGGACACAAG TTGCGTTACC GACGGAAGTA TTAACAACAA AATAGTTGTA ACGGCCAAAA CAGTGTATGT TTACATAGGA ACCGACAACG ACATTAAATA CAAGCAGGTA GTTCTGGGAA CAGAACTTTA CTCTGTGAGT AAAACAAAAA CAGGTTATGA TGTCCTTCTT CCCAATAATA AAAAAGGCTG GGTTGAGGAT GGCGGAGTTA TAGCCGTTCC CGTTTCACAG AACAGTATAC CCAAAACTTC TGCACAAGGA TTTATACAAA CCGTCAGTAA ATTTGAAGGA ACCATATATA TAATAGGAGG TGTCAGCAGG TGGGGTATCG ACTCCCCGGG TTTATGCTAT ATCAGCAGTA GGATTAACGG TGTGGAAATA CCCCGTAATA TCAAGGAGAT GGCAAAGACG GGGACAGGTG TTACGCTTGA CGAAATGAAA CCCGGAGACC TTCTTATGTT CAGTACGGAC AATGTAAAAA AGGACGTCTC TGGTGTAGGG GTTTACAAGG GAAACAACGA ATTTATTCAT TCTAGCCCTT CCAGGGGTGT TGTAACTGAT TCCTTGGAGG ACAGCTATTA CAAAAATCGA ATAGTTGATA TAAGAAGGAT TTTCTAG
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Protein sequence | MRKHLIIYIF AVTTAIILTL AGCGNRDIPV TKNEQYVSGI TWDNAAIIND AVVDVFSRND ILSTRITQAL FNQIVKIVSQ EGSWTRIMLL DGTTGWVKTK YISRDTSCVT DGSINNKIVV TAKTVYVYIG TDNDIKYKQV VLGTELYSVS KTKTGYDVLL PNNKKGWVED GGVIAVPVSQ NSIPKTSAQG FIQTVSKFEG TIYIIGGVSR WGIDSPGLCY ISSRINGVEI PRNIKEMAKT GTGVTLDEMK PGDLLMFSTD NVKKDVSGVG VYKGNNEFIH SSPSRGVVTD SLEDSYYKNR IVDIRRIF
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