Gene Ccel_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0029 
Symbol 
ID7308950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp30070 
End bp31995 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content32% 
IMG OID643606957 
Producthypothetical protein 
Protein accessionYP_002504397 
Protein GI220927488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AGTCAATACT ACAAAGGCTT GAAGATGAGA AGAGAGATGA AGTTTTATCT 
GCAAAATTAT ATAGGTATAC CGGACTAATG CAGGCTATAG AGTACTTTTC ACAAAAACTT
GTGTTTAAAC AGATAATTGA GGCTGCTTTT GATTTTATAA ATGAATTGTT GCTTGTAAAC
AACTCTATAG TGTATGTTCT TGAAGAGGGT AAATACACTG CCAAGAAGGT TAAGGGTTTT
AAAGATTACC CAAAAGAAAT AGAAGCCACA AGTACACTTG AGAACCTTGC TGCTTTATAT
GGAAATGTCC TGTATGAAAA AGATAAAATA GCCAGGTTTT TTGACATGGA AATGGTTTCA
AATATGGGTA TAAATGCCGT AGTGCCTCTG ATTATAGAAG AACACCTATA TGGTTTTATA
ATGATAAATG GAAAGGATTT TGTAGATGAT GAGTATATTA TATCAGAGTC CCTGATGCGT
CTTATAAATA CTGCCCTTGA AAACTACAGC AGATATGAGA AACTGGCTAA AGTAAATAAG
GAGCTTGATG AAAAGGTATT TAACCTTTTT GCAATAAATC AGTCATCAAA GGTATTGCTA
AGTGAATTAC GAATCAATAC TTTATATAAC TTGTCTGTAG AATTATTTTC CGAATTAACA
AGGAGTATGG TCACAAGCTT TATTTTATAT GATGAAAGAA GTGGAAGATA TGTTTTAAAG
GGTTTTAAGG ATGTTTTTTA CAAGATTAAG GATGCTTTTA TTAGTCTTTC TCTTAATCAA
ACCTACAAAA TTGATCCTAA TAAGGTTATT ATAGATCTAG GAAATCCAGA TGACAGTCAT
TACTTTTACA ATCTGTTTGA AGATTCTGCT ATTCAGGTAG ATAAACTTGA GGCAAAGTAT
ATTGTCATAA TTATAAAAGA AAGTGAGATT CTTGGTTTTG TCACTTTGAG TAAAACCGTT
ACTGGTGACA ATTATAGCAG CGGTGTATTT GAACTTATAG AAAGCCTTGC TTCATCAATG
TATATTGCTG TAAGCAACGC TAATCTATTT AAACAGGTAA ATGAGCAGAA ACAAATTATT
CAAAGAAAGT TGGATAAACT TATTTGTTTG AATAAATTAA TAAAAAATAT AAGCAGTTCA
TTAAGGATAG ATACACTTAT GGAAGTTGCA GCTAAAACCC TTGAAATTTC TTTTAATTTG
CAAAAGGGAC TGCTTTGTCT TTATGATAAG GACTCAGATG AGTTTAGTAT ATCGGAATCA
ATCGGTTTAG ACGGTAATTT AAACAAAAAC ATACTCCCAA ATAACAAATG GAGGCGTGTT
TTTGAGGGTG ACTGTGTTTA TGAAATCGGG AAGGATAAAG TAGCCGAATA TATTGGATAT
GAGGTAGCTG AAAGGGTCGG TGAGGCTCAG GGAATACTAA TTGTACCTAT ATATGTAGAT
ACTTTGGAAG TTGAGCTGTC GGGAGTAATT ATTATTTTCA AGTACGATGG TTTGCTTTTA
GATAATGAAG AAAATCTTAT AACTCTTGAA ACAATTGCAG GACACATAGC CCCGGTGTTA
AAGAATCTAT CGGTTATTCA GATGCAGCAG CGGTTCATGC TGCCGAATTT TATAGAACTC
TTCAAAAATG AGTTAAAGGG TGAAATCAGG GATGCAATGG ATTATAATAT AAACTTATCG
GTTATACAGG TAGAGGATAA AAGAGATTTT ATTTTCAAAG GTACAAGTAT TATTGATAGT
ATAAAAGAGA ACTTCAAAAA GGTTTATCCA TTTTCATATA ACAATGTATT TATTATTGAA
AATGAAGACG AAAATATTGA AGAGCGTATA AAAAGATGTA CGGGAATTTC TGATCTAAAA
ATCAGGAAGA TGGTCCTAGG GAAGGACTTT AAAGATTTTG CAAATTTCTT TGATCTTTTC
AGATAA
 
Protein sequence
MKYQSILQRL EDEKRDEVLS AKLYRYTGLM QAIEYFSQKL VFKQIIEAAF DFINELLLVN 
NSIVYVLEEG KYTAKKVKGF KDYPKEIEAT STLENLAALY GNVLYEKDKI ARFFDMEMVS
NMGINAVVPL IIEEHLYGFI MINGKDFVDD EYIISESLMR LINTALENYS RYEKLAKVNK
ELDEKVFNLF AINQSSKVLL SELRINTLYN LSVELFSELT RSMVTSFILY DERSGRYVLK
GFKDVFYKIK DAFISLSLNQ TYKIDPNKVI IDLGNPDDSH YFYNLFEDSA IQVDKLEAKY
IVIIIKESEI LGFVTLSKTV TGDNYSSGVF ELIESLASSM YIAVSNANLF KQVNEQKQII
QRKLDKLICL NKLIKNISSS LRIDTLMEVA AKTLEISFNL QKGLLCLYDK DSDEFSISES
IGLDGNLNKN ILPNNKWRRV FEGDCVYEIG KDKVAEYIGY EVAERVGEAQ GILIVPIYVD
TLEVELSGVI IIFKYDGLLL DNEENLITLE TIAGHIAPVL KNLSVIQMQQ RFMLPNFIEL
FKNELKGEIR DAMDYNINLS VIQVEDKRDF IFKGTSIIDS IKENFKKVYP FSYNNVFIIE
NEDENIEERI KRCTGISDLK IRKMVLGKDF KDFANFFDLF R