| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0021 |
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| Symbol | |
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| ID | 7308943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 21120 |
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| End bp | 22688 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643606949 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002504389 |
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| Protein GI | 220927480 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTGG AGCTGTTAAA ACAGGCATTT AAAGTAAGCA ATTTATTAGG TGAGGATACA
ATAGATAATG TTATTGAAAA TGATATAATT GTTCCGGATG TTAAACCGGA TATTGCCAAG
ATACTTCTTC TGGATGGGGA TGTTTTCGTT ACCGGGTGTG ATACAGGTAC TGACAGGGCC
GTAGTTTCAG GCTGCCTGCT GGTAAAGATT CTATATATTT CAGAAGATGA GAATAGAAGC
GTTAAAAGTA TTACGACAAA TATTCCATTT TCTTATACTT TGGATATCCC CGGTGTAAGA
AGCGGTGTAA AAAGCAGAGC AAAGGGTACA ATTGAGCATA TAGATTACAC CCTCCTTAAT
GAAAGAAAAG TAAATATTAA AGCTATTATA TCAATTAACT GCAAGGTAAC TGATGAAATA
GAAAGGGAGA TATCTTCAGG TATAACAGGT ATAGATGATA TTCAGGTTTT GAAGGATGAT
ATAGATATAA ATACCTATCT GGGCAGTAAC AAGGTAAACT TTATACTTAA AGAGGATATG
GAGCTGCCAT CTACTAAGCC TTCTGTTGCT GAAATTCTAA GAAATGATTT GAAGATTTCA
GGAAAGGATT TTAAAATAAC AGACGGAAAT GTGGTAGTAA AAGGTGATAT TAATATTGCT
ACCTTGTACA TAGCAGATGA TGAAACCAGA AGTATGCAGT ATATGGAGAA TGAGCTGACT
TTTACGCAGT TTATTGAACT GGAGGATGTT AAGGAGGATA CTTCTGTTAA TGTGGATTTT
GATTTGATCG ATTACAAGAT TGAACCTTTT GAGGACAGTG ACGGAGAAAA TAGAAATCTC
AGGGCTGAAG CCACTATAAA TATTTATGTA ACCGGCCTGT GTAAGAGGTC TTATGAGGTG
CTATCAGACG CCTACAGTCC AATAATTAGA ATCAATCTTG AAAAACAGCA ATTCTCAATT
GATGAAACCG TCTCGGAAAA CAGAAGCCAG CTTATTGTAA AGGATACATT GAATTTTGAG
GATTTCAACC CGGAAGTGCG TGAGATATTT AATGTCATTA GCAGATGCAG TGTATCTGAA
ACCCACTTAG AGGATGAAAA ATTAAATATA GAGGGTTCAG TGCTTAATAA TGTTATATAT
TTGTCCAACG ACGAAGAACA GCCTGTATTC TGTCATAGCA AGGAAATTCC CTTTAAACAC
GTTGTTGAGA TAAAGGGACT GAAAAATGAT ATGAAGGTTG ATACTAATGT GGAAATTGAA
CATTGCAATT ATAGTATGCT TTCATCGGAT CAGGTGGAAA TCCGCTGTGC GATAGGAATT
AATGCCAGAG TTGAAACAAA TAAGGTTATT CCCATCATAA ACAAAGCTAC GGAAGGTATC
ATAGATGAGA AGAAACTACT TTCTATGCCT AGTGTAATAA TATATATTGT GCAACCCGGT
GATAGTTTGT GGAAAATAGC AAAAAAATAC TCTACAACTG TGGAAAATCT TCTTATGGTA
AATAATTTAA ACGATAAGGA CGTTTTAATG CCGGGGCAGC AGCTGCTTAT TTTAAAAAGG
GCAATGTAA
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| Protein sequence | MSLELLKQAF KVSNLLGEDT IDNVIENDII VPDVKPDIAK ILLLDGDVFV TGCDTGTDRA
VVSGCLLVKI LYISEDENRS VKSITTNIPF SYTLDIPGVR SGVKSRAKGT IEHIDYTLLN
ERKVNIKAII SINCKVTDEI EREISSGITG IDDIQVLKDD IDINTYLGSN KVNFILKEDM
ELPSTKPSVA EILRNDLKIS GKDFKITDGN VVVKGDINIA TLYIADDETR SMQYMENELT
FTQFIELEDV KEDTSVNVDF DLIDYKIEPF EDSDGENRNL RAEATINIYV TGLCKRSYEV
LSDAYSPIIR INLEKQQFSI DETVSENRSQ LIVKDTLNFE DFNPEVREIF NVISRCSVSE
THLEDEKLNI EGSVLNNVIY LSNDEEQPVF CHSKEIPFKH VVEIKGLKND MKVDTNVEIE
HCNYSMLSSD QVEIRCAIGI NARVETNKVI PIINKATEGI IDEKKLLSMP SVIIYIVQPG
DSLWKIAKKY STTVENLLMV NNLNDKDVLM PGQQLLILKR AM
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