| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0016 |
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| Symbol | |
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| ID | 7308939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 13334 |
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| End bp | 16885 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643606944 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
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| Protein accession | YP_002504384 |
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| Protein GI | 220927475 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0384233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGAC ATAAACAATC GATGGATGGC AATACAGCTG CCGCACACGT AGCCTATGCT
TTTACTGATG TTGCTGCCAT TTACCCAATT ACACCTTCAA GTCCAATGGC CGATTCTGTT
GACCAATGGT CTGCTGCAGG TAGGGAAAAC ATTTTTGGTA ATCAGGTTAA AGTTGTTGAA
CTTCAGTCTG AGGCAGGAGC TGCGGGAACT GTTCACGGTT CTTTAGCTGC AGGTGCTCTT
ACAACAACAT TCACAGCTTC ACAAGGTCTT CTTTTGATGA TTCCTAATAT GTACAAAATC
GCAGGTGAAT TACTTCCTAG CGTATTCCAC GTTTCTGCAC GTACAGTCGC TACACATGCT
TTGAACATCT TTGGTGACCA TAGTGACGTA TATGCTTGCC GTCAAACTGG TTTTGCAATG
TTGGCTGAAT CAAACCCACA GGAAGTAATG GATTTAAGTG CAGTTGCACA CCTTGCAACT
CTTGAAGGAA AAGTTCCTTT TATAAACTTC TTTGATGGTT TCCGTACATC CCACGAAGTT
CAAAAAATTG ACACATGGGA TTACGCAGAT CTAAAAGAAA TGTGTGACAT GGATTCTGTA
AGGGCTTTTC GTGACCATGC ATTGACTCCA GAAAAACCAT CAATGCGCGG TTCACATGAA
AATGGAGATA TATTCTTCCA GCACCGTGAA GCATGTAACA CCACATATGA TAAATTACCG
GCTATTGTTG AAAAATACAT GGCTAAGGTT AACGCAAAGC TTGGTACAAA TTATGATTTA
TTCAATTATT ACGGAGCACC GGATGCTGAC CGTGTTATAA TTGCTATGGG TTCATTCTGT
GATGTAGCTG AAGAAGTAAT AGATTATTTA ACAGCTGCAG GCGAGAAGGT TGGACTTATC
AAGGTACGTT TGTATCGTCC ATGGGTATCC AGTAGTCTTC TTAAGGTTCT TCCTGAGACA
GTCAAGAAAA TTGCAGTACT TGATCGTTCA AAAGAACCTG GAGCATTAGG CGATCCTTTA
TATCTTGACG TTGCTACAAC TCTTCGTGAA GCAGGACTTA ATGATATAGT TGTAACTAAT
GGTCGTTATG GGCTCGGTTC AAAGGATACT CCTCCTTCAT CAGTATTTGC TGTATTCACT
GAATTAAAGA AGGATGCTCC TAAGCCACGT TTTACAATCG GTATAGTGGA TGATGTTACA
TATTTAAGCT TACCTGAAGT TAAACCAGCA CCTATAACTG CTGCTGCAGG TACAGTTGAA
TGTAAGTTCT GGGGTCTCGG TGGAGATGGT ACAGTTGGAG CTAATAAGAA CTCAACCAAG
ATTATCGGTG ACCACACAGA CAAATATATT CAAGCATATT TCCAATATGA CTCTAAGAAA
ACAGGTGGTG TAACAATCTC CCATCTTAGA TTCGGTGACA AGCCAATCAA GAGTCCATAT
TACGTAAATC AGGCTGACTT TGTTGCATGT CACAATCCGT CTTACATCGT TAAGGGTTTC
AAGATAGTTC AAGATGTTAA GCCAGGCGGA ATTTTCATGA TTAACTGCCA GTGGTCAGAC
GAAGAATTAA ATTCAAAATT TAATGCTGCT ACAAAGAAAT ATATTGCAGA CAATAATATT
CAGTTGTATA CAATAAACGC TATTGATAAA GCTGCCGAAA TTGGTATGGG TAAACGTACT
AATACTATAC TTCAATCAGC ATTCTTTAAA TTAGCAAACG TAATGCCAAT AGACGATGCA
ATTAAATTTA TGAAGGAAGC TGCAAAGAAA TCCTATGGTA AGAAGGGTGA TGCTATTGTA
GAAATGAACT ACAAGGCGAT CGATGCAGGT GTAAGTGCAC TTCATAAAGT TACAGTTCCT
GCTTCATGGT CTAACCCTGA AGCTGACCCG GCTGAACCTA AGCTCGATGG ACGTCCTGAA
TTAGTTGATA TGGTTAAGAA TCTGCTTAAC CCAATATCAT TAATGGATGG TGACAGCCTG
CCGGTATCTG CTTTCGCTAA TATTGCAGAC GGACAATTTG AAATGGGTGC TTCCGCATAT
GAAAAGCGTG GTACTGCCGT ATTGGTTCCA GAATGGGATG CAAGCTTATG TTTACAATGT
AATAGCTGTG CATTTGTATG TTCACATGCA ACTATTCGTC CATTCATGCT GAGTGAAGAT
GAAATAAAGG CAGCACCTTC TAACATAAAA TTAGCTGATA CCAGGCCAAA AGCTAGTGAA
TACAAGTTCA CTATGAGCGT ATCTCCTTTG GATTGTATGG GTTGCGGTGA ATGTATTACT
GTATGTCCTG TTAAGGAAAA AGCAATTAAG ATGGTACCTC AAGAATCACA AGCTCAAGAA
CAACCGGTAT TTGATTATCT GGTTGCTAAT GTTGGAAAGA AACCAGGAAT GCCTGCTGAT
ACTACTGTTA AGGGATCACA GTTCAACCAA CCGCTGCTCG AATTCTCAGG AAGCTGTGCA
GGATGTGCTG AAACATCATA TGCTCGTTTA GTAACTCAGT TATTCGGTGA GCAAATGTAT
ATTTCAAATG CTACAGGATG TTCTTCAATC TGGGGAGGTC CTGCTGCAAC CAGCCCATAT
ACAGTAAATA AGGATTCACA AATGGGTCCG GCATGGGCAA ACTCATTGTT TGAAGATAAC
GCTGAGCATG GCTACGGTAT GCAACTGGGA CAGAAGGTTC TCCGTGAACA GGCGATTGCC
AAGATAGAAA AGCTTGCTGT ATCTGATAAG GCATCTGATG AATTGAAGGC TGCAATTGCT
AAATTCATTG AGACAAAGGA TATGACAAGA GAAAATACAC CTGCTACAAA GGCATTGGTT
GTAGAACTTG AAAAAGCTGC TGCTGCTGGA TGTGACCTTT CCAAGGAAAT ACTTGAAAAG
AAACAGTATC TTTCTAAGAA ATCTGTATGG ATTCTTGGTG GTGACGGATG GGCATATGAT
ATCGGTTTCG GTGGACTTGA CCATGTACTT GCTTCAGGAG AGAATGTAAA CGTTATGGTA
TTTGATACAG AAATGTACTC AAATACAGGC GGACAGGTAT CCAAAGCTTC CAACATAGGT
GGAGTTTGTC AGTTTGCTGC ATCAGGTAAG GAGATAGGTA AGAAGAGTCT TGCTGAAATT
GCTATGACCT ATGGTTACGT GTATGTAGCA CAGATTGCTC TTGGTGCTAA TCCGAATCAG
ACAATTAAAG TTATTGCTGA AGCAGAAGCT TATAACGGAC CATCATTGAT AATTTGCTAT
GCTCCTTGTG AACTCCATGG AGTTAAGGGT GGTATGAATC ATTGTCAGGA TGAAATGAAG
AAAGCCGTAG CTTCTGGATA CTGGAATCTG TTCTCATTTA ACCCTGCTCT TAAGGCTGAA
GGAAAGAATC CATTTACTTT AACCTCCAAG CCGGGTGATG GAACATATCA GGATTTCTTG
AATAATGAAA CACGTTACAC TCGTTTACAG CGTTCATTCC CAGAGCGTGC AGAAAGACTC
TTTAAGGAAT CTGAGAAAGC TGCTAAGGAA CGTTACGAGC ATTTGGTAAA GTTAGTAGAG
CTTTATAAAT AA
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| Protein sequence | MSRHKQSMDG NTAAAHVAYA FTDVAAIYPI TPSSPMADSV DQWSAAGREN IFGNQVKVVE
LQSEAGAAGT VHGSLAAGAL TTTFTASQGL LLMIPNMYKI AGELLPSVFH VSARTVATHA
LNIFGDHSDV YACRQTGFAM LAESNPQEVM DLSAVAHLAT LEGKVPFINF FDGFRTSHEV
QKIDTWDYAD LKEMCDMDSV RAFRDHALTP EKPSMRGSHE NGDIFFQHRE ACNTTYDKLP
AIVEKYMAKV NAKLGTNYDL FNYYGAPDAD RVIIAMGSFC DVAEEVIDYL TAAGEKVGLI
KVRLYRPWVS SSLLKVLPET VKKIAVLDRS KEPGALGDPL YLDVATTLRE AGLNDIVVTN
GRYGLGSKDT PPSSVFAVFT ELKKDAPKPR FTIGIVDDVT YLSLPEVKPA PITAAAGTVE
CKFWGLGGDG TVGANKNSTK IIGDHTDKYI QAYFQYDSKK TGGVTISHLR FGDKPIKSPY
YVNQADFVAC HNPSYIVKGF KIVQDVKPGG IFMINCQWSD EELNSKFNAA TKKYIADNNI
QLYTINAIDK AAEIGMGKRT NTILQSAFFK LANVMPIDDA IKFMKEAAKK SYGKKGDAIV
EMNYKAIDAG VSALHKVTVP ASWSNPEADP AEPKLDGRPE LVDMVKNLLN PISLMDGDSL
PVSAFANIAD GQFEMGASAY EKRGTAVLVP EWDASLCLQC NSCAFVCSHA TIRPFMLSED
EIKAAPSNIK LADTRPKASE YKFTMSVSPL DCMGCGECIT VCPVKEKAIK MVPQESQAQE
QPVFDYLVAN VGKKPGMPAD TTVKGSQFNQ PLLEFSGSCA GCAETSYARL VTQLFGEQMY
ISNATGCSSI WGGPAATSPY TVNKDSQMGP AWANSLFEDN AEHGYGMQLG QKVLREQAIA
KIEKLAVSDK ASDELKAAIA KFIETKDMTR ENTPATKALV VELEKAAAAG CDLSKEILEK
KQYLSKKSVW ILGGDGWAYD IGFGGLDHVL ASGENVNVMV FDTEMYSNTG GQVSKASNIG
GVCQFAASGK EIGKKSLAEI AMTYGYVYVA QIALGANPNQ TIKVIAEAEA YNGPSLIICY
APCELHGVKG GMNHCQDEMK KAVASGYWNL FSFNPALKAE GKNPFTLTSK PGDGTYQDFL
NNETRYTRLQ RSFPERAERL FKESEKAAKE RYEHLVKLVE LYK
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