Gene Ccel_0010 details

Gene Information

• Locus tag: Ccel_0010
• ID: 7308933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 9000
• End bp: 9761
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 643606936
• Product: TPR repeat-containing protein
• Protein accession: YP_002504378
• Protein GI: 220927469

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTC ATTTTCATAG TAATAAAGAA AATAAAAATG AAAAAAAACA AATATGGATG 
TATGCCGTAA TTTTGTTTAC AGGTGCGTTT ATTATACTTT TATTGACTGC ATACAGCCAG 
GTAAAGTTTC AGAATAATAT AAGCGACTAT CAGAATAAAC TTTCTTCGCA GGAAAAAGCG 
AAGCTTACTG CTGTAACAGA CTTAAAATCA GCTTTAAAGG AAAATGAAAG ACTAAATAAA 
GAATTGGAAT CTCTACGAAA TAAATTGATA GAGTCTGAGC AGGAAATTGC TACCCAAAGC 
TCTAAAACAA CTGATATAGA GTCAAAATAC AATAGTTCTG TAATTGCAAC TGATGCACTT 
ATAGCTGCCA TGGAGTATTA CAATAATAAA GATTATGTAA ATGCTGCTGT TACACTTAAA 
TATGATGTTA AAATTGAATA TTTGAGTCCA AAGGTTATAA ATACCTATAA TGATTTAGTG 
GAAAAGAGCT ATGGTAAAGC CTCCTTAAAG TCGTATAGGG ATGGTTACAG AGACTATAAA 
AATAAAAATT ATGCAGGGGC AATAATTAAT TTAAACCGTG CAATTGATTT TTCAAAAAAG 
AATGAATATT ACATTGATGA CGCATACTAT TATTTAGCAA ACTCATATTA TAAGAGTTCA 
AACTTTACTG ATGCAAAAAG AATAATAAAT GCATTTCAAA CTGATTATCC GAAAAGTGAG 
TTTGCAAGAA GTATGAGAAA TCTGTTGGAA AAAATATCGT AG 

 

Protein sequence

MNIHFHSNKE NKNEKKQIWM YAVILFTGAF IILLLTAYSQ VKFQNNISDY QNKLSSQEKA 
KLTAVTDLKS ALKENERLNK ELESLRNKLI ESEQEIATQS SKTTDIESKY NSSVIATDAL 
IAAMEYYNNK DYVNAAVTLK YDVKIEYLSP KVINTYNDLV EKSYGKASLK SYRDGYRDYK 
NKNYAGAIIN LNRAIDFSKK NEYYIDDAYY YLANSYYKSS NFTDAKRIIN AFQTDYPKSE 
FARSMRNLLE KIS