| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7647 |
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| Symbol | |
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| ID | 7308571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 7743772 |
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| End bp | 7745406 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643605197 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_002502681 |
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| Protein GI | 220927379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG CACCAGGCCA GACAGAAGAC ACTCTCGCCT CCTACAACAG GAAGCGAGAC
TTCACACAGA CGGCAGAGCC GAAGGGGCGC GTGACAAGCG GGGGTGGCCA CCGCTTTGTC
GTCCAGAAGC ATGCGGCGAG GCGCCTGCAC TACGACTTCC GCCTGGAGCT CGACGGTGTT
CTGCTCAGTT GGGCCGTCGC GCGCGGGCCG AGTCTCGACC CCGCTGACAA GCGGCTCGCG
GTCCGCACGG AGGATCATCC CGTAGCCTAT GCCGACTTCG AAGGAACCAT CCCGCAGGGC
AACTACGGCG CAGGGACGGT GATGCTGTGG GATCGCGGAA CGTGGTCGCC TGACGGAGAT
CCACACGAGG CAATCAAAAA CGGCAGGCTG CGCTTCACTC TTCATGGAGA GCGCATGCGC
GGCGCTTGGC TGCTGATCCG AATGAAGGGT AGCAAGCGCG AGAACTGGCT CCTGCGCAAG
CTTGAGGACG ACGAGGCGAA CAGGGACAGC GATCTCACTC AGAGCCATAC ATCGAGCATC
ACGACGGGCC GCTCTTTGGA GCAGATCGCT GCGGGAGAGC GCACCTCGAC ACGACGCTCG
TCAAACCTTG CCGCATCGCG GCCCATGCCG CTCGAGCATC GCGCCGAGCC ACCAATTCCT
GTCAGCTTGC GCGATGACAA GCCCGCGGAC GAGGTGAGGG CTGAGCACGC GCAGCCAGTC
GTGCAGGCCA CCAAGCGTGC AAGAGCGAGA GCAGCCGAAA GGGCGATGAT CTCGCACGGC
GTGCGGATCA CCAGCCCCGA CCGTCAGCCG TACCCGCAGG CCAAGGTCAG CAAGCGCGAT
CTCGTGGCCT ACTACGAGCA GGTCTCTGTG GTGATGCTGC CGCACATCTC AGGCCGGCCG
CTCACGCTGA TCCGCTGCCC GCGCGGCGTT GATGCACGCT GCTTCGTCCA GCAGCACGCC
GCCCCTGGGT TCCCGGAGGC CGTTCGGACG GTGAGCATCA CCGAGGCGTC TGGCGAGACG
CAGAACCACA TCTACGTCGA AGACTTGGCG GGCATCTTGG CCTGCGTGCA GATCGGAGCC
CTCGAGTTTC ACGGCTGGGG AGCGCGTGCC GGCGCGCTTG AGGTGCCGGA TCGTCTCGTC
CTCGACCTCG ATCCCGATCC GGCCGTGGCG TTCGGCGCAG TGGTGGATGC CGCTCTGTTC
ATTCGCGACC GTCTGCTGGA GGACGGCCTG AGCTCATGGC CGATGCTGTC GGGTGGCAAA
GGCGTACACG TGATCGTGCC GCTGACCGGG GCGACGTGGC CGGCGGTCAG TGCTTATGCA
AAGCAGCTGG CGCAGGCGAT GGAGAAACAG GCGCCCGAGC GGTTCACGGC GGAGATGGCG
AAGACCGATC GGTCCGGACG GATCTTCATC GACTACCTGC GCAACCAGCG TGGAGCGACC
GCCGTGATGC CCTACTCGAC GCGAGCGAAG GCCAGCGCGT CGATTGCGAT GCCGCTCGAC
TGGGACCGGC TCGGGCAGAC CACGTCCGCT CAAGCCTACA CAGTCCATGA TGTTCTCGAG
AAAGGGCTGC CCGAGGTGGC CGAGCAGGCA AGTGCGCCGC AGCGACTGCC GAGGAGTTCC
CCAGGCGGAG AGTAG
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| Protein sequence | MSTAPGQTED TLASYNRKRD FTQTAEPKGR VTSGGGHRFV VQKHAARRLH YDFRLELDGV
LLSWAVARGP SLDPADKRLA VRTEDHPVAY ADFEGTIPQG NYGAGTVMLW DRGTWSPDGD
PHEAIKNGRL RFTLHGERMR GAWLLIRMKG SKRENWLLRK LEDDEANRDS DLTQSHTSSI
TTGRSLEQIA AGERTSTRRS SNLAASRPMP LEHRAEPPIP VSLRDDKPAD EVRAEHAQPV
VQATKRARAR AAERAMISHG VRITSPDRQP YPQAKVSKRD LVAYYEQVSV VMLPHISGRP
LTLIRCPRGV DARCFVQQHA APGFPEAVRT VSITEASGET QNHIYVEDLA GILACVQIGA
LEFHGWGARA GALEVPDRLV LDLDPDPAVA FGAVVDAALF IRDRLLEDGL SSWPMLSGGK
GVHVIVPLTG ATWPAVSAYA KQLAQAMEKQ APERFTAEMA KTDRSGRIFI DYLRNQRGAT
AVMPYSTRAK ASASIAMPLD WDRLGQTTSA QAYTVHDVLE KGLPEVAEQA SAPQRLPRSS
PGGE
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