| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7411 |
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| Symbol | |
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| ID | 7307789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 7499391 |
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| End bp | 7501679 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643604965 |
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| Product | ribonuclease R |
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| Protein accession | YP_002502451 |
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| Protein GI | 220927149 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00900108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCAAAC GCACTGCCCC GAAAGCCGAC CACGGCGCCC TTCCGTCCCG CGAGGCCGTC
CTCGCCTTCA TCGCGGAGGC GACCACCAAG GTCGGCAAGC GCGAGATCGC CAAGGCCTTC
GGCCTCAAGG GGGCCGACAG GCTCGAGCTC AAGCGCATGC TCGCCGAGCT CAAGGAGGAG
GGAATCGTCG AAAAGGACCG TTCCGGCCTG CGCAAGGCCG GGCGCCTGCC GCCAGTCCTC
GTCGCCGATA TCGATGCGCG CGACCGCGAC GGCGAGTTGC TGGCGAGCCC CGCCCAGTGG
GATCCGGAGG CCGGCCCTGC CCCGAAGATT CTCGTCATGA TGCCCCGCGG GCGGCGCTCC
GGCGCGCTGC CCGCGCCCGG CATCGGCGAC CGCGCGCTGC TGCGCGTCGA GCCCGACCGG
GAGGCCCCCG GCCGCTATAT CGGCCGCGTC GTCAAGGTCA TCGGCCGCAA CAAGGCCGAG
GTGCTCGGCG TCTACCGCGC CCTGGAGAAG GGCGGCGGAC GCGTCCTGCC CGTCGACAAG
CGCGCGCAAG GCCGCGAGAT CGCGATTCCG GCCGGCCAGG AGGGCGAGGC GCGCGACGGC
GACCTCGTCA GCGTGGCGCT CGCCCGCGAG GGGCGCCTCG GCCTGCCGCA GGGCCGCGTG
AAGGAGCGGC TCGGCGCGAT CAGTTCCGAG AAGGCCGTCA GCCTCATCGC GCTCCACGCT
CACGGCATCC CGCATGTCTT CCCCCGGGAG GTGCTGGCCG AGGCCGAGCG CGCGGCGTCG
GCCGGGATGG AGAATCGCGA GGATTGGCGT GACGAGCCCC TCGTCACCAT CGATCCGCCG
GACGCCAAGG ACCACGACGA CGCGGTCAGG GCGGTGCCGG ACCCGGATCC GGCCAATGCC
GGCGGCTTCC TCGTTACGGT CGCCATCGCG GATGTCGCCG CCTATGTGCG GCCGGGCAGC
CCCCTCGACC GCGAGGCGCT CGCGCGCGGC AACTCGGTCT ATTTCCCCGA CCGGGTCGTG
CCGATGCTGC CGGAGCGGAT CTCGAACGAC CTCTGCTCCC TGCGCCCCGG CGAGGACCGG
CCGGCCCTGG CGGTTCGCCT CGTCATCGGC GCGGATGGGC GCAAGAAGCG CCACAGCTTC
CACCGGGTGA TGATGCGCTC GGCGGCGAAG CTCGCCTATG CGCAGGCGCA AGCGGCGATC
GAGGGGCAGC CGGATGCGGT CACCCTCCCG CTCCTGGAGC CGAGCTTACG CCCGCTCTGG
GCGGCGTATC GGCTGATGGC GAGGGCGCGC GACGCCCGCG GCCCCCTCGC CCTCGACCTG
CCCGAGCGCA AGGTGATCCT CGATGCCGAA GGCGGCGTCG ACCGGGTCGT CGTGCCCGAG
CGGCTGGAGG CACATCGCCT CATCGAGGAG TTCATGATCC AGGCCAACGT CGCCGCCGCG
GAGACGCTGG AGGAGAAGGC CCAGGCGCTG ATCTACCGCG TGCACGACGA GCCCTCGCTC
GAGAAGATGC GGGCGCTCGG CGAGGTCCTG GCCTCGATCG GCATCAAGCT GCCCAAGGAA
GGGGTGCTGC GCCCCTCCCT GTTCAACCGC ATCCTCGGCC TCGTCGACGG CACCGAGCAT
CAGGTCTTCA TCAACGAGGT CATCCTCCGG TCGCAGGCCC AAGCGGTCTA TGCGCCGGAG
AATGTCGGAC ATTTCGGGCT GGCGTTGCGC CGCTACGCCC ATTTCACCTC GCCGATCCGG
CGCTATGCCG ACCTCGTCGT GCACCGGGCG CTGATCCGGG CGCTCCGCCT CGGCCCGGAC
GGGCTGCCCG ACATGGGGAC GGGCGAACTC GCCGAGATCG GCCAGCAGAT CTCCATGGCC
GAGCGCCGCG CCATGGCGGC GGAGCGCGAG ACCATCGACC GGCTGATCGC CCAGCACCTC
GCCGACCGCG TCGGGGCCAC CTTCGCGGGC CAGATCTCCG GCGCCACCCG CGCCGGGCTG
TTCGTGAAGC TCGACGAGAC CGGCGCCGAC GGCTTCGTGC CGGTCTCGAG TCTCGGGGCG
GATTACTTCC GCCTCGAGGA GGGGCGGCAC GCCCTCGTCG GCGAGCGCAC GGGCGAGACC
TTCCGGCTCG GCGACCGGAT CACGGTGCGG CTCGTGGAAG CAGCCCCCGT TGCAGGCGCC
TTGCGCTTCG AAGTGGTATC GGAGGGTGCA CGCGGCGCGC CGGCGCCGCG CCGGGGTGGC
CTGCGCAAGG GGCGCGCGCT GCCGGAGCGT CGCGAGGGCC TGGCCAAGCG AAGGGGGAAG
CGGGCATGA
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| Protein sequence | MAKRTAPKAD HGALPSREAV LAFIAEATTK VGKREIAKAF GLKGADRLEL KRMLAELKEE
GIVEKDRSGL RKAGRLPPVL VADIDARDRD GELLASPAQW DPEAGPAPKI LVMMPRGRRS
GALPAPGIGD RALLRVEPDR EAPGRYIGRV VKVIGRNKAE VLGVYRALEK GGGRVLPVDK
RAQGREIAIP AGQEGEARDG DLVSVALARE GRLGLPQGRV KERLGAISSE KAVSLIALHA
HGIPHVFPRE VLAEAERAAS AGMENREDWR DEPLVTIDPP DAKDHDDAVR AVPDPDPANA
GGFLVTVAIA DVAAYVRPGS PLDREALARG NSVYFPDRVV PMLPERISND LCSLRPGEDR
PALAVRLVIG ADGRKKRHSF HRVMMRSAAK LAYAQAQAAI EGQPDAVTLP LLEPSLRPLW
AAYRLMARAR DARGPLALDL PERKVILDAE GGVDRVVVPE RLEAHRLIEE FMIQANVAAA
ETLEEKAQAL IYRVHDEPSL EKMRALGEVL ASIGIKLPKE GVLRPSLFNR ILGLVDGTEH
QVFINEVILR SQAQAVYAPE NVGHFGLALR RYAHFTSPIR RYADLVVHRA LIRALRLGPD
GLPDMGTGEL AEIGQQISMA ERRAMAAERE TIDRLIAQHL ADRVGATFAG QISGATRAGL
FVKLDETGAD GFVPVSSLGA DYFRLEEGRH ALVGERTGET FRLGDRITVR LVEAAPVAGA
LRFEVVSEGA RGAPAPRRGG LRKGRALPER REGLAKRRGK RA
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