| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7124 |
|---|
| Symbol | |
|---|
| ID | 7304666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 7205556 |
|---|
| End bp | 7206929 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643604678 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_002502167 |
|---|
| Protein GI | 220926865 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA AACCTCCCTC CCGCGGCGGC CGCTCGCAAT CCGGCCCGGC CGGGCGCCGG
CCCGCCCGGC CGCCGGCGCG GGCGCGCACG GGGCCGCGCA ACACCGCACG GGATGCCGCC
CAGCGCGCCG CCGGCGGCCG CGATCTGAGC GACGCCGCGC CCTGGGCACG GGACGAGGAG
GGCAGGGCAC CCGGCCCCGC CGCCAAGCAG AACCCGGCCA AGCCAAACCC GGCCAAGCCG
AATCGCGGCA AGCCCAGCCC TGACAAGCCC GCCCGCCAGC CGGCCGCCTC CCGGGCCGCC
CCGGCCCGGC CGCCGCGGCC GGCCCCCGCA ACCGGACCGA CGCGCCGGGA GATGCGGGAG
GCGACTGCGG CAGCGCTTGC AACCGGCGTG CAGATGCTGG AGGTGACGCC CGACGAGGCC
GGGATGCGCA TCGACCGCTT CCTGTCCGCA CGCTTCCCGC AGCTGCCCTT CACCCGCATC
CAGAGCCTGG TGCGCAAGGG GGAATTGCGG GTCAACGGCA AGCGGGCCAA GGCCGCCGAC
CGGGTCGAGC CCGGCGCGAG CGTGCGCGTA CCGCCGCTCA AGCTCGATGC GCCGCCGTCT
AGCCCCAGCC CCGCCAGGGC GGAGAGCGAC CTCGCCTTCC TGCGCTCCCT GGTGCTCTAC
GAGGACCAGG ACATGATGGT GCTCAACAAG CCCTTCGGCC TCGCGGTCCA GGGCGGCTCG
GGCACGAAGC GGCATGTGGA CGGGCTGCTT GAGGCTCTGC GCACGCCGGA CGGCCAGAAG
CCACGGCTCG TCCACCGCCT CGACAAGGAC ACGGCGGGCT GCCTCGTCGT CGCCAAGTCC
CGCCTCGCCG CCGCGACTTT GGCCAAGACC TTCCGGTCGC GCGCGGCGCG CAAGATCTAC
TGGGCGCTCG CCGCGGGCGT GCCGCGGGTG CGCCAGGGGC GGATCTCCAC CTATCTCGCC
AAGGAGGAGA TGGGCGATGC GGATGCCCGG ATGCGGGTCG CCCAGCACGG GGACGAGGGG
GCGAGCCACG CGCTCACCTA CTACGCGGTC GTCGATCAGG CAGGCCAGAA GCTCTCCTGG
CTGTCGCTGA AGCCGGTCAC CGGGCGCACG CACCAGCTGC GCGCGCACGC CGCCCATATC
GGGCACCCGC TCGTCGGCGA CCCGAAATAT TTCGACATCG AGAACTGGGA GCTGCCGGGG
GGCCTGCAGA ACCGCCTGCA CCTGCTCGCC CGCCGCATCG TCATCCCGCA TCCGCGCACC
AACAAGCCCG TGGACGTGAC CGCGCCGCTG CCGCCGCACA TGGCTCAGAG CTGGAACCTG
CTCGGCTTCG ACGCCAGCCG CTACGACCCG ATCGTCGAGG CGCCCGAGAG TTAG
|
|---|
| Protein sequence | MTAKPPSRGG RSQSGPAGRR PARPPARART GPRNTARDAA QRAAGGRDLS DAAPWARDEE
GRAPGPAAKQ NPAKPNPAKP NRGKPSPDKP ARQPAASRAA PARPPRPAPA TGPTRREMRE
ATAAALATGV QMLEVTPDEA GMRIDRFLSA RFPQLPFTRI QSLVRKGELR VNGKRAKAAD
RVEPGASVRV PPLKLDAPPS SPSPARAESD LAFLRSLVLY EDQDMMVLNK PFGLAVQGGS
GTKRHVDGLL EALRTPDGQK PRLVHRLDKD TAGCLVVAKS RLAAATLAKT FRSRAARKIY
WALAAGVPRV RQGRISTYLA KEEMGDADAR MRVAQHGDEG ASHALTYYAV VDQAGQKLSW
LSLKPVTGRT HQLRAHAAHI GHPLVGDPKY FDIENWELPG GLQNRLHLLA RRIVIPHPRT
NKPVDVTAPL PPHMAQSWNL LGFDASRYDP IVEAPES
|
|---|
| |