Gene Mnod_6902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6902 
Symbol 
ID7301631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp6984986 
End bp6986023 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID643604457 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002501950 
Protein GI220926648 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACG AGCCGGATTC CACCAGCGAC GGCGGCCTCT CGCGCCGGAG CTTCCTGACC 
GCCGCGGCCG CCGTCCCGCT GGTCGCGATC CGCACCCGGC CGGCGCTGGC GGCCGAGTTC 
AGCTACAAGC TCGCGACGGG CCAGTCCCTC ACCCAGCCCA TCAATGCCCG CCTCGAGCAG 
GCCACCCAGC GCATCCGCGA GGCCTCGGGC GGGCGCCTGG AGATGAAGTT CTTCCCCGCG 
AGCCAGCTCG GCTCGGACAC GGACCTGATC ACGCAGGTGC GCTCGGGCGG GATCGAGTTC 
CTCAACATCG CCGGATCGGT GATCTCGACC GTCGCGGCGG GCGCCGCGAT CACCAATGTC 
GGCTTCGCCT TCGCGGATTA CGAGCAGGTC TGGCGGGGGG CGGACGGGCC GATCGGCCAG 
TACGTGCGCA GCCAGATCGA GAAGGCGGGT CTGCTCGTCC CGGCCAAGGC CGCGGACAAC 
AGCTTCCGGC AGATCACCTC GGCGTCGAAG CCGATCAAGA CCCCGGAGGA CCTGAAAGGC 
TACCGCATCC GCGTGCCGGT CTCGCCGATC TTCACCTCGC TGTTCTCGGC GCTCGGGGCG 
AACCCCACCT CCATCAACTT CAACGAGCTC TACACCGCGC TGCAGACCCG GCTGGTCGAC 
GGCCAGGAGA ACGGGCTCGT GGCGATCGAC GCCGGCAAGC TCTACGAGGT GCAGAAATAC 
GTCTCCGAGA CGAACCACAT CTGGGATCCC TTCTGGATCG TGGCGAACCG GCGCGCCTTC 
GGCCGCCTGC CCGAGAGCCT GCAGGAGATC GTCCGGCGCG AGTTCGACCG GGCGGCGATG 
GAGCAGCGCG AGGACGTCGC GCGGCTGAAT GGCACGCTGA AGACGCAGCT TTCGGCCAAG 
GGGCTGGTTT TCGAGAGCGC CGACAAGGAG GCGTTCCGCC GGAGCCTCGG CCAGGCCGGC 
TTCTACCGCG ACTGGAAGGA GAAGTTCGGG CAAGAGGCCT GGAAGGCCCT CGAATCCGTC 
ACGGGAGCCC TCGCATGA
 
Protein sequence
MTNEPDSTSD GGLSRRSFLT AAAAVPLVAI RTRPALAAEF SYKLATGQSL TQPINARLEQ 
ATQRIREASG GRLEMKFFPA SQLGSDTDLI TQVRSGGIEF LNIAGSVIST VAAGAAITNV 
GFAFADYEQV WRGADGPIGQ YVRSQIEKAG LLVPAKAADN SFRQITSASK PIKTPEDLKG 
YRIRVPVSPI FTSLFSALGA NPTSINFNEL YTALQTRLVD GQENGLVAID AGKLYEVQKY 
VSETNHIWDP FWIVANRRAF GRLPESLQEI VRREFDRAAM EQREDVARLN GTLKTQLSAK 
GLVFESADKE AFRRSLGQAG FYRDWKEKFG QEAWKALESV TGALA