| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6863 |
|---|
| Symbol | |
|---|
| ID | 7304809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 6943969 |
|---|
| End bp | 6945558 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643604418 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_002501911 |
|---|
| Protein GI | 220926609 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGA CTTTGGGCTT TTCCAGTGGG TTGGCGTTGG GAGCATTTGT CGCCGCGCAC
CCGGACCTCG TCCGGGACGC GTCCGGCCCC GCCCTGCAAA AAGTCCTGGA CCGGATCTAT
GCGATTTCAG TCCTGCCAGA GACGGTGGGG GCCGCCAAGA CGCTCGTGAG CGACAGGAAG
TTGGTCTCCC CCGCCGCGGG TGTTGCACAG GCGCAGCCGA CGGCTCGGCC TTCTTTGGTT
CAAACGGCTT CGGCGGTCGC CAGCGATCCA GAAACGGCCG AGCCCACGGC CAAAGCCGTC
GGTGCTGCCG CGAATCCGCC CGCCGGCACG CCGATCGGGG TCGGGGACCG CCTCAAGCTC
GCCTTCTACG AGCGCCTCGA CGTCGAGGAG GACAAGTGGG GCCGGGCGGC CTCCGCTATG
AAGGGAATCC AGCAGCGGCC GGAGCTGAGC GGCGAATACG CGGTCCAGGA AGACGGCACC
ATTATGGTGC CGCTGCTCGG TCAGATCCCG GCCGCCGGAC GCAGAACTGC CGAGATCCAG
GCGGCTCTGG CCAAGGCCTT TTCACAGGCG CTGGGCCGAA AAGGGCTAGT CAACATCCTG
GCCCTGGAGC GTTCTCCAGT TTACGTGCTT GGCCTGGTCA AGAACCCTGG CTCGTATAAG
TACGCTTCGG GCATGACGGT CATGCACGCG CTGGCCCTGG CCGGCGGCCT CGAACGCGCC
GGCATGGAGC CGTGGCAGAA ACTTGAGGCG GTGCGCGAGG TTGAGAAGCG CAACGGGGCC
ACGCAGACCA TTCTCAAGCT TCTGGCGCGG GTCGCCGTCC TCAGGGCAGA ACGCGACGGC
ACTCAGCCGA AAATTCCGCT CAAGCTGGTC GAGTTGATTG GCGCCTCCGA GGCCCGCAGT
TTCATCAGTG GGGAGAGCGA ACGCCGCAAA GCTATCGCGC AAACCCGCCG CAATCGGGAG
GTGGCGATCG CCGCCGCCCT CGATGCAGAA CGGCAGGCCC TGGACATGAT GAAGGGCCGG
CTGGGTCCGA TCGATGATCT GGTCCGCCTA CGGCAGGAGC GCGTCAACAG CATGAAGGCG
CTCGTCAGCA GGAACATCCT GGCCAATACT GTGGTCAATC AGGTCCTGAG CGAGCTGAGC
GACGCCGAGC AGCGGCGCCA GGAGGCCCTC AACCAATACA GCATGGCGAG TGCGCGCCTG
TCGTCCCTGG AGCAGGAGGC CAACCGGATC CGCGCGGAGA ACAAGTCGGA TCTGCAAACC
GAAATCGACG TGATCGAGCG CTCACTCACT GATGCCGAAC GCGAGATAAA CACCAGCCAT
GGCATTCTCT CTAGCTTGAC GACCAGCCAC ATCGGGTCCG GCGGCCAGAA GGGCGTCACC
TACGAGATCG TCCGCCAGAC GGCAGCCGGG CCGATCTCCA TCATGTCGGA TGGCATGACG
GTGCTTCAGC CCGGCGATCT CGTCAATGTC GACCGCAGCG CCGATTCTAA GGATGAGGCG
CTGCCCTCCG AGCCCAATGT AGCCGTTCCG ACTAGCGACC AAGTCGACCT CCAGCCGCAC
CCCTCCCTGC CCGTGCGGCC TCGGACCTGA
|
|---|
| Protein sequence | MALTLGFSSG LALGAFVAAH PDLVRDASGP ALQKVLDRIY AISVLPETVG AAKTLVSDRK
LVSPAAGVAQ AQPTARPSLV QTASAVASDP ETAEPTAKAV GAAANPPAGT PIGVGDRLKL
AFYERLDVEE DKWGRAASAM KGIQQRPELS GEYAVQEDGT IMVPLLGQIP AAGRRTAEIQ
AALAKAFSQA LGRKGLVNIL ALERSPVYVL GLVKNPGSYK YASGMTVMHA LALAGGLERA
GMEPWQKLEA VREVEKRNGA TQTILKLLAR VAVLRAERDG TQPKIPLKLV ELIGASEARS
FISGESERRK AIAQTRRNRE VAIAAALDAE RQALDMMKGR LGPIDDLVRL RQERVNSMKA
LVSRNILANT VVNQVLSELS DAEQRRQEAL NQYSMASARL SSLEQEANRI RAENKSDLQT
EIDVIERSLT DAEREINTSH GILSSLTTSH IGSGGQKGVT YEIVRQTAAG PISIMSDGMT
VLQPGDLVNV DRSADSKDEA LPSEPNVAVP TSDQVDLQPH PSLPVRPRT
|
|---|
| |