| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6838 |
|---|
| Symbol | |
|---|
| ID | 7304784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 6918847 |
|---|
| End bp | 6919731 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643604400 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002501893 |
|---|
| Protein GI | 220926591 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTC GTGCCCTTCG GACCCTGCAC GCCATTGCCC AGCATGGATC CTTTGCTCGT
GCCGGCGAGG TCGTTGGGCT GACGCAGTCG GCGGTGAGCT TGCAGGTGAA GATGCTTGAG
GAGGAGTTCG GCGCGCGGCT CTTCGACCGG TCGCGCCGGC TGCCGCGGCT CACTGAGGCG
GGCAGGATCG TTCTCGAAAA ATCAGCGGAG GTGCTGGCGC TCTATGACCA GATCGCGTCC
GCACTGAGCG ACGAACAGTC CCTGGCCGGG CGTCTTCGGC TCGGAGCCGT CCAGACCGCG
CTGTCCGGCG TGCTGCCGGA GGCACTGGCC GCTCTCAACC AATCGCACCC TCGCGTTCGC
GTCCACGTCT CTGCTGGCAT GTCGGCGGAG CTTGCCTTGC GGATCGCTGC CGGGGAGCTG
GACGCGGCCG TGACGACCGA ACCGGTCCGG CCACATCCTC CGGACCTGGT CTGGACGCCC
CTCTATGAGG ACCGCTTCTG GCTGATCGCG CCGCCTGGCC ACGATGCGCG AAGCCCGCGC
GAGTTGCTGT CCGAGCTGCC TTTTATCCGC TTCGACAGCC ACGCTTGGGC CGGCCGCGTG
ATTGACCGCG AGTTGCGGCG AATGCGGCTG GATGTCCGCG AGGAAATGGT GCTGGACAGT
CTGGAGGTCA TCCTGAGGAT GGTCGAAAAA GGACTGGGCG TCGCCGTTGT CCCACTTTCA
GATGATGTGC TTGCGACACT CCGTTTGACG ACCCTGCCGT TCGGCGAACC GCAGCTGATC
CGGCGCATTG TGCTTCTGGA AAGACAGGAC TGTACCGGTG GGCGACTGTC CGCCGCGCTC
GCTCAAGCCG TAATGGACAT CAAGAAGGGC GCAGTTCCCG GATGA
|
|---|
| Protein sequence | MSLRALRTLH AIAQHGSFAR AGEVVGLTQS AVSLQVKMLE EEFGARLFDR SRRLPRLTEA
GRIVLEKSAE VLALYDQIAS ALSDEQSLAG RLRLGAVQTA LSGVLPEALA ALNQSHPRVR
VHVSAGMSAE LALRIAAGEL DAAVTTEPVR PHPPDLVWTP LYEDRFWLIA PPGHDARSPR
ELLSELPFIR FDSHAWAGRV IDRELRRMRL DVREEMVLDS LEVILRMVEK GLGVAVVPLS
DDVLATLRLT TLPFGEPQLI RRIVLLERQD CTGGRLSAAL AQAVMDIKKG AVPG
|
|---|
| |