Gene Mnod_6780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6780 
Symbol 
ID7304163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6867141 
End bp6868037 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content73% 
IMG OID643604347 
Producthistone deacetylase superfamily 
Protein accessionYP_002501841 
Protein GI220926539 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGG TCGTGTTCCA TCCGGCCTAT GAGGCCGGAC TGCCGGACGG CCATCGCTTC 
CCGATGCGCA AATACGGGCG GCTCGCCGAG ATCCTGGTCG AGCGCGGGCT GGTGCCGAAC
GGCTTCGCGC GGCCGGAGCC GGCCGGTGCC GGCACCGTGG CGCTCGCCCA TGACCCTTTT
TATGTCGAGC AGGTGCTGAC CGGCACCGTT CCGCGCGCGA TCGAGACGGC GATCGGCCTG
CCCGTCGATG CGGGCGTGGC ACGGCGCGCC CTCGCCTCGG CGGGCGGCAC GCTGCTCGCC
GCCCGCCTCG CGCTGGCGGG CGGGCTCGCG GGCAGCACCG CCGGGGGCAG CCATCACGGG
CGGCGGGCCC GGGGCGGAGG ATTCTGCGTC TTCAACGACG TGGCGGTGGC GGCGCTGGCG
CTCCACCGGG AGGGCACGAT CCGCCGCGCG CTGATCATCG ATCTCGACGT GCACCAGGGC
GACGGCACCG CGGATTGCCT CGCGGCCGAG CCCGACCTCT TCACCTTCTC GATGCACGGC
GAGAAGAACT ATCCGGCCGA CAAGGTGCCG GGCGACCTCG ATATCGGCCT GCCGGACGGG
CTCGACGACG ACGGCTATCT GGCGGTGCTG CATCAGCACG TGCCGCGCCT CCTCGACGCG
CTCGCGCCCG ATCTCGTCTT CTACAATGCC GGCGTCGACC CGCACCGCGA CGACCGCCTC
GGGCGCCTCG CGCTCACCGA TGCGGGCCTC GCCGCCCGCG ACCGCCACGT GATCGGCGAG
ACGCGCCGCC GCGGCATCCC GCTCGCCGCG GTGATCGGCG GCGGCTACGC GGCGGATATC
GACGCGTTGG CCGCGCGCCA CGCCCTGGTC TTCGAGGCGA TGGCGCAATG GGTCTGA
 
Protein sequence
MLPVVFHPAY EAGLPDGHRF PMRKYGRLAE ILVERGLVPN GFARPEPAGA GTVALAHDPF 
YVEQVLTGTV PRAIETAIGL PVDAGVARRA LASAGGTLLA ARLALAGGLA GSTAGGSHHG
RRARGGGFCV FNDVAVAALA LHREGTIRRA LIIDLDVHQG DGTADCLAAE PDLFTFSMHG
EKNYPADKVP GDLDIGLPDG LDDDGYLAVL HQHVPRLLDA LAPDLVFYNA GVDPHRDDRL
GRLALTDAGL AARDRHVIGE TRRRGIPLAA VIGGGYAADI DALAARHALV FEAMAQWV