Gene Mnod_6728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6728 
Symbol 
ID7306748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6815571 
End bp6817271 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content73% 
IMG OID643604298 
Productthiamine pyrophosphate protein 
Protein accessionYP_002501792 
Protein GI220926490 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.988038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCGA ACGGATCGGG GCGCAGCGCC GCCCGCGTGC TGGTGGACCA GCTGGTGGCG 
AACGGCGTGC GCCACGTCTT CACGGTGCCG GGCGAGAGCT TCCTGCCGGT CCTCGACGCC
CTGCGCGATT CCGGCATCGC GGTCACGACC TGCCGTCAGG AGGGCGCCGC CGCCATGATG
GCGGAGGCGC ACGGCAAGGC GACCGGAGAG CCCGGCATCT GCTTCGTCAC GCGGGGGCCG
GGCGCCACCA ACGCCTCGGC GGGGCTGCAC GTGGCGCAGC AGGATTCGAC CCCGATGATC
CTGTTCGTCG GGCAGATCGA GCGGCGCTTC CGCGAGCGCG AGGCCTTCCA GGAACTCGAC
TACCGGGCGG TGTTCGGGCC GATGGCCAAG TGGGCGACGG AGATCGACGA TCCCGACCGG
GTGCCGGAAC TCGTCTCGCG CGCCTTCGCG ACCGCGACCG CCGGCCGGCC CGGCCCCGTG
GTGGTGGCGC TGCCCAAGGA CATGCTGACG GAGACGACCG AGGCGCCGCT CGCGCCGCCC
TTCGTGCCCG TGGAGGCGGC GCCCGGCGCC GACGACGTCG CGCTCCTCGC CGACCTCATC
GCCTCGGCCG AGCGCCCGAT CCTGGTGCTG GGCGGCAGCC GCTGGAGCGA GGCCGCCTGC
GCCGACATCG CGCGCTTCGC GAAAACCTTC GACCTGCCCG TCGCCACGAG CTACCGGCGC
AGCCCGCTCT TCGATGCGCT CCACCCCTGC TATGCGGGCG ATCTCGGCCT TGCCGCCAAT
CCCCGGCTGG TCGCGCGGGT GAAGGCCGCC GACCTCGTCG TGCTGCTCGG CGGGCGCCTC
GGCGAGATCC CCTCGCAGGG CTACAGCCTC CTCGCCATCC CGGGGCCGCA GACGCGGCTC
GTGCACATCC ATGCGGGCCC CGAGGAGCTC GGCCGCGTCT ACCGGCCCTT CCTCGCCATC
AACGCGGCGC CGGCGCGCAC TGCCGCGGCG CTCGCGCGCC TCTCAGCCCC CGCCCGCATC
CCGTGGCGGG CCGAGACCCG CACCGCGCAC GAAGACTTTC TCGCCTGGGG CGAGGCCGCG
ACGCCGCAGC CGGGCGGGGT CAATCTCGGC GCGGTGATCA TCCACCTGCG CGAGACTCTT
CCCGGCGACG CGATCCTGTG CAACGGGGCG GGCAACTACG CGGCCTGGAT CCACCGCTTC
TTCCGCTTCC GCAGCTTTGC CGGCCACATC GCCCCGACCT CGGCCTCGAT GGGCTACGGC
CTGCCGGCCG CGGTGGCGAT GAAGCGCCTG TGGCCCGCGC GCAGCGTGAT CTCGCTCAAC
GGCGACGGCG ACTTCCTGAT GAACGGCCAG GAATTCGCGA CCGCCGTGCA GTACCGGCTG
CCGATCGTGG TGATCGTCTG CGACAATGCG AGCTACGGCA CGATCCGGAT GCACCAGGAG
CGCGAATTCC CCGACCGTCC GATCGCGACC GACCTGCATA ATCCGGATTT CGCCGCCTAT
GCCCGGGCCT TCGGCGGCCT CGGCTGGACC GTCGAGCGGA CCGAGGACTT TCCGGCGGCC
TTCGCGGCGG CGCACGAGTC CGGCCGGCCC TCGATCATCC ACCTGAAGAT CGCGACCGAC
GCGATCACCC CGGGCCAGAC CCTGACGCAG ATCCGCGAGG CGGCGCTGGC GAGGCGGGAG
GGGACGGGCG CCACGGCTTG A
 
Protein sequence
MRANGSGRSA ARVLVDQLVA NGVRHVFTVP GESFLPVLDA LRDSGIAVTT CRQEGAAAMM 
AEAHGKATGE PGICFVTRGP GATNASAGLH VAQQDSTPMI LFVGQIERRF REREAFQELD
YRAVFGPMAK WATEIDDPDR VPELVSRAFA TATAGRPGPV VVALPKDMLT ETTEAPLAPP
FVPVEAAPGA DDVALLADLI ASAERPILVL GGSRWSEAAC ADIARFAKTF DLPVATSYRR
SPLFDALHPC YAGDLGLAAN PRLVARVKAA DLVVLLGGRL GEIPSQGYSL LAIPGPQTRL
VHIHAGPEEL GRVYRPFLAI NAAPARTAAA LARLSAPARI PWRAETRTAH EDFLAWGEAA
TPQPGGVNLG AVIIHLRETL PGDAILCNGA GNYAAWIHRF FRFRSFAGHI APTSASMGYG
LPAAVAMKRL WPARSVISLN GDGDFLMNGQ EFATAVQYRL PIVVIVCDNA SYGTIRMHQE
REFPDRPIAT DLHNPDFAAY ARAFGGLGWT VERTEDFPAA FAAAHESGRP SIIHLKIATD
AITPGQTLTQ IREAALARRE GTGATA