Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_6728 |
Symbol | |
ID | 7306748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 6815571 |
End bp | 6817271 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643604298 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_002501792 |
Protein GI | 220926490 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.988038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGCGA ACGGATCGGG GCGCAGCGCC GCCCGCGTGC TGGTGGACCA GCTGGTGGCG AACGGCGTGC GCCACGTCTT CACGGTGCCG GGCGAGAGCT TCCTGCCGGT CCTCGACGCC CTGCGCGATT CCGGCATCGC GGTCACGACC TGCCGTCAGG AGGGCGCCGC CGCCATGATG GCGGAGGCGC ACGGCAAGGC GACCGGAGAG CCCGGCATCT GCTTCGTCAC GCGGGGGCCG GGCGCCACCA ACGCCTCGGC GGGGCTGCAC GTGGCGCAGC AGGATTCGAC CCCGATGATC CTGTTCGTCG GGCAGATCGA GCGGCGCTTC CGCGAGCGCG AGGCCTTCCA GGAACTCGAC TACCGGGCGG TGTTCGGGCC GATGGCCAAG TGGGCGACGG AGATCGACGA TCCCGACCGG GTGCCGGAAC TCGTCTCGCG CGCCTTCGCG ACCGCGACCG CCGGCCGGCC CGGCCCCGTG GTGGTGGCGC TGCCCAAGGA CATGCTGACG GAGACGACCG AGGCGCCGCT CGCGCCGCCC TTCGTGCCCG TGGAGGCGGC GCCCGGCGCC GACGACGTCG CGCTCCTCGC CGACCTCATC GCCTCGGCCG AGCGCCCGAT CCTGGTGCTG GGCGGCAGCC GCTGGAGCGA GGCCGCCTGC GCCGACATCG CGCGCTTCGC GAAAACCTTC GACCTGCCCG TCGCCACGAG CTACCGGCGC AGCCCGCTCT TCGATGCGCT CCACCCCTGC TATGCGGGCG ATCTCGGCCT TGCCGCCAAT CCCCGGCTGG TCGCGCGGGT GAAGGCCGCC GACCTCGTCG TGCTGCTCGG CGGGCGCCTC GGCGAGATCC CCTCGCAGGG CTACAGCCTC CTCGCCATCC CGGGGCCGCA GACGCGGCTC GTGCACATCC ATGCGGGCCC CGAGGAGCTC GGCCGCGTCT ACCGGCCCTT CCTCGCCATC AACGCGGCGC CGGCGCGCAC TGCCGCGGCG CTCGCGCGCC TCTCAGCCCC CGCCCGCATC CCGTGGCGGG CCGAGACCCG CACCGCGCAC GAAGACTTTC TCGCCTGGGG CGAGGCCGCG ACGCCGCAGC CGGGCGGGGT CAATCTCGGC GCGGTGATCA TCCACCTGCG CGAGACTCTT CCCGGCGACG CGATCCTGTG CAACGGGGCG GGCAACTACG CGGCCTGGAT CCACCGCTTC TTCCGCTTCC GCAGCTTTGC CGGCCACATC GCCCCGACCT CGGCCTCGAT GGGCTACGGC CTGCCGGCCG CGGTGGCGAT GAAGCGCCTG TGGCCCGCGC GCAGCGTGAT CTCGCTCAAC GGCGACGGCG ACTTCCTGAT GAACGGCCAG GAATTCGCGA CCGCCGTGCA GTACCGGCTG CCGATCGTGG TGATCGTCTG CGACAATGCG AGCTACGGCA CGATCCGGAT GCACCAGGAG CGCGAATTCC CCGACCGTCC GATCGCGACC GACCTGCATA ATCCGGATTT CGCCGCCTAT GCCCGGGCCT TCGGCGGCCT CGGCTGGACC GTCGAGCGGA CCGAGGACTT TCCGGCGGCC TTCGCGGCGG CGCACGAGTC CGGCCGGCCC TCGATCATCC ACCTGAAGAT CGCGACCGAC GCGATCACCC CGGGCCAGAC CCTGACGCAG ATCCGCGAGG CGGCGCTGGC GAGGCGGGAG GGGACGGGCG CCACGGCTTG A
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Protein sequence | MRANGSGRSA ARVLVDQLVA NGVRHVFTVP GESFLPVLDA LRDSGIAVTT CRQEGAAAMM AEAHGKATGE PGICFVTRGP GATNASAGLH VAQQDSTPMI LFVGQIERRF REREAFQELD YRAVFGPMAK WATEIDDPDR VPELVSRAFA TATAGRPGPV VVALPKDMLT ETTEAPLAPP FVPVEAAPGA DDVALLADLI ASAERPILVL GGSRWSEAAC ADIARFAKTF DLPVATSYRR SPLFDALHPC YAGDLGLAAN PRLVARVKAA DLVVLLGGRL GEIPSQGYSL LAIPGPQTRL VHIHAGPEEL GRVYRPFLAI NAAPARTAAA LARLSAPARI PWRAETRTAH EDFLAWGEAA TPQPGGVNLG AVIIHLRETL PGDAILCNGA GNYAAWIHRF FRFRSFAGHI APTSASMGYG LPAAVAMKRL WPARSVISLN GDGDFLMNGQ EFATAVQYRL PIVVIVCDNA SYGTIRMHQE REFPDRPIAT DLHNPDFAAY ARAFGGLGWT VERTEDFPAA FAAAHESGRP SIIHLKIATD AITPGQTLTQ IREAALARRE GTGATA
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