Gene Mnod_6625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6625 
Symbol 
ID7308465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6722559 
End bp6723743 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID643604195 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002501696 
Protein GI220926394 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAC CGAAGATCAA GCACATCCGG GCCAGCGTCG TCCGTGGCGG CGGAGGCGAC 
TACCACGATG TCGAGGACGG CCACTGGATC GACGATCACA TCGCGACCCC CATGGCCCGC
TACCCGGAAT ATCGGCAGAG CCGGCGCTCC TTCGGCATCA ATGTGCTCGG CACGCTCGTG
GTGGAGGTGG AGGCCGACGA CGGCACGAAG GGCTTCGCCA TCACCACCGC CGGTGAGATC
GGCGCCTTCA TCGTCGAGAA GCACCTGGCC CGTTTCATCG AGGGCCGGCC CGTCACCGAC
ATCGAACGGG CCTGGGATCA GATGTACTTC TCGACCCAGT ATTACGGCCG CCGCGGGATC
GTGGTGAACG CGATCTCGGC CGTGGATCTG GCCCTGTGGG ACCTGCTGGG GAAATGGCGG
GAGGAGCCGG TGCATGCGCT GCTCGGCGGC CCCGTGCGCG ACGAGCTCGT GTTCTACGCG
ACCGGTGCCC GGCCCGACCT TGCCAAGCAG CTCGGCTTCA TCGGCGGCAA GCTGCCCCTG
CAGCACGGAC CGGCGGAGGG CGAGGAGGGG CTGAAGCAGA ACCTCGCCAA GCTCGAGGAC
ATGCGCAACA GGGTCGGCGA CGATTTCTGG CTCATGTACG ATTGCTGGAT GAGCCTCGAC
CTCAACTACG CCACGCGGCT GGCGCACAAG GCGCACGAGT TCGGCCTGAA GTGGATCGAG
GAATGCCTTT CCCCCGATGA TTACTGGGGC TATGCCGAGC TGCGCCGAAA TATTCCGCGC
GGCATGCTGG TCACCACGGG CGAGCACGAG GCGACGCGCT GGGGCTTCCG CATGCTGCTG
GAGATGGGCT GCTGCGACAT CATCCAGCCG GATGTGAACT GGTGCGGGGG CATCACCGAG
CTGATCAAGA TCTCGGCCCT GGCCGATGCG CACGGGGCGC TAATGGTGCC GCACGGCTCC
GGCCCGTACA GCTACCATTT CTGCTGCACG CGGCATAACA GCCCGTTCAA CGAGATCATC
ATGAGCGCGC CGAAGGCGGA CAGGGTGCTG CCTGCCTTCC ACCCGCTGCT GGTGAATGAG
CCGGTGCCGG AGAATGGACG GCTGAAGCTC TCCGCGCTCG ACAAGCCCGG CTTCGGCGTC
GAACTGAACC CCGCATGCAC GCTTCACCGG CCCTATACGC ACTGA
 
Protein sequence
MSVPKIKHIR ASVVRGGGGD YHDVEDGHWI DDHIATPMAR YPEYRQSRRS FGINVLGTLV 
VEVEADDGTK GFAITTAGEI GAFIVEKHLA RFIEGRPVTD IERAWDQMYF STQYYGRRGI
VVNAISAVDL ALWDLLGKWR EEPVHALLGG PVRDELVFYA TGARPDLAKQ LGFIGGKLPL
QHGPAEGEEG LKQNLAKLED MRNRVGDDFW LMYDCWMSLD LNYATRLAHK AHEFGLKWIE
ECLSPDDYWG YAELRRNIPR GMLVTTGEHE ATRWGFRMLL EMGCCDIIQP DVNWCGGITE
LIKISALADA HGALMVPHGS GPYSYHFCCT RHNSPFNEII MSAPKADRVL PAFHPLLVNE
PVPENGRLKL SALDKPGFGV ELNPACTLHR PYTH