| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6400 |
|---|
| Symbol | |
|---|
| ID | 7305941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 6499240 |
|---|
| End bp | 6500748 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643603987 |
|---|
| Product | tricarballylate dehydrogenase |
|---|
| Protein accession | YP_002501488 |
|---|
| Protein GI | 220926186 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR02485] precorrin 3B synthase CobZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.479436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAT CCTGGGACAT CGTCGTCGTC GGCTCCGGCA ATGCCGCGAT GAGCGCGGCG
ATCGCGGCAC GCGAGCAGGG CCGGAGCGTC CTCGTCATCG AGAAGGCCAC GGAGGAACTG
GCGGGCGGCA ACACCGCCTA CACGGCTGGC GCCATGCGCT TCGTCTACAA CGGGAACGAC
GACCTGCTGC CGCTGCTCGC CGACCCGGAC GATCCGCGCC TCGCCCGCAC CGATTTCGGC
GCCTACACCG CCGAGCGCTT CACCGCGGAC CTCCTCGGCT TCAACGACAG GCGGCCGCTG
AGCCGCGAGC AGCAAACGCT GATCGCCGAG AGCTACGATG CGGTCCGCTG GCTGGCTTCG
CAGGGCGTTA AGTTCGAGCC GATCTACTCC CGCCAATCCT TCGAAAAGGA CGGGCGCTTC
ATCTTCTGGG GCGGACTGAC GCTCGCCACG CACAACGAGG GCTTCGGCCT CGCCGAGGCC
GAGCGCGCCG CCTTCGCGGC GCTCGGCGGC GAGATCCGCT ACGATTGCGC CGCGACCGAT
CTCGTCACGG AGGGCGGGCG CGTGCGCGGC ATCCGGGTGC GCAACGGCGC GGGCGAGGCG
GGCGTGATCG CCGCCAAGGC CGTCGTTCTC GCCTGCGGCG GCTTCGAGTC GAATGCGCAG
ATGCGGCGCG AGCTCATCGG ACCAGGCTGG GAGGCCGCGA AGGTGCGTGG CACGCCGTAT
AACCAGGGCG ACGGGATCGC GATGGCACTG CGCCTCGGCG CAAAGCGGCA CGGTTTCTAC
GGCGGCTGCC ACGCTACGCC GATGGACCTG CACACGCCCG ACTACGGCAA CCTCGACCTG
CCGCACCTCG AGCGCAAGCA CTACCGCAAG ATCTGCTACT TCCTTGGCGT GATGCTGAAC
GCGCGCGGCG AGCGCTTCGT CGACGAGGGC AGGGACTTCC GCAACTACAC CTACGCCCAG
TTCGGGCGCG CCATCATGGA GCAGCCTGGC CATGTCGCGT GGCAGATCTT CGACGCGAAG
GTCGATCACC TGCTCTACAG CGAGTATCGC TTCCATGACG CGCACTTCGT CGAGGCCGAT
ACGCTGGAGG CTTTGATCGA CAAGCTCGAC GGCATCGATA AGGCGCAGGC TCTCGCCACC
ATCGCGCAGT TCAACGCCGC GGTCGATCCG GCCGTGCCGT TCGATCCGAC GGTGAAGGAC
GGTCGCGCCA CGAAGGGGCT CGCCCTGCCG AAGTCGAACT GGGCGCAGGC CATCGAAACC
GGCCCGTTCA AGGCCTATCC GGTCACCGGC GGCATCACCT TCACCTATGG CGGCGTCGAA
GTGGACGAGG CCGGCGGCGT GATGCACGAG AACGGCAGCC CGATTCCCGG CCTCTATGCC
TGCGGCGAGA TGGTCGGCGG CGTGTTCTTC AACGGCTATC CGGGCGGCTC GGGCCTGACC
TCGGGCGTGG TGTTCGGCCG GCGCGCCGGA GCTGGGGCCG CCGCATGGAC GGCTCGCGCC
GCCGCCTAA
|
|---|
| Protein sequence | MQTSWDIVVV GSGNAAMSAA IAAREQGRSV LVIEKATEEL AGGNTAYTAG AMRFVYNGND
DLLPLLADPD DPRLARTDFG AYTAERFTAD LLGFNDRRPL SREQQTLIAE SYDAVRWLAS
QGVKFEPIYS RQSFEKDGRF IFWGGLTLAT HNEGFGLAEA ERAAFAALGG EIRYDCAATD
LVTEGGRVRG IRVRNGAGEA GVIAAKAVVL ACGGFESNAQ MRRELIGPGW EAAKVRGTPY
NQGDGIAMAL RLGAKRHGFY GGCHATPMDL HTPDYGNLDL PHLERKHYRK ICYFLGVMLN
ARGERFVDEG RDFRNYTYAQ FGRAIMEQPG HVAWQIFDAK VDHLLYSEYR FHDAHFVEAD
TLEALIDKLD GIDKAQALAT IAQFNAAVDP AVPFDPTVKD GRATKGLALP KSNWAQAIET
GPFKAYPVTG GITFTYGGVE VDEAGGVMHE NGSPIPGLYA CGEMVGGVFF NGYPGGSGLT
SGVVFGRRAG AGAAAWTARA AA
|
|---|
| |